Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ush2AQ2QI47 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ush2AQ2QI47 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC11.5□□□□□ -0.57
Ush2AQ2QI47 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ush2AQ2QI47 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Gm37856-201ENSMUST00000191634 999 ntBASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.49□□□□□ -0.57
Ush2AQ2QI47 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ush2AQ2QI47 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Gm13148-201ENSMUST00000118892 745 ntBASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Gm25925-201ENSMUST00000158314 306 ntBASIC11.48□□□□□ -0.57
Ush2AQ2QI47 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ush2AQ2QI47 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.47□□□□□ -0.57
Ush2AQ2QI47 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.47□□□□□ -0.57
Ush2AQ2QI47 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ush2AQ2QI47 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ush2AQ2QI47 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ush2AQ2QI47 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.46□□□□□ -0.57
Ush2AQ2QI47 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.46□□□□□ -0.57
Ush2AQ2QI47 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ush2AQ2QI47 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ush2AQ2QI47 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.46□□□□□ -0.57
Ush2AQ2QI47 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.46□□□□□ -0.57
Ush2AQ2QI47 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC11.46□□□□□ -0.57
Ush2AQ2QI47 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ush2AQ2QI47 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ush2AQ2QI47 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC11.46□□□□□ -0.58
Ush2AQ2QI47 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ush2AQ2QI47 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.46□□□□□ -0.58
Ush2AQ2QI47 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.46□□□□□ -0.58
Ush2AQ2QI47 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 Mir5133-201ENSMUST00000174955 77 ntBASIC11.45□□□□□ -0.58
Ush2AQ2QI47 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC11.45□□□□□ -0.58
Ush2AQ2QI47 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC11.45□□□□□ -0.58
Ush2AQ2QI47 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ush2AQ2QI47 AC165080.2-201ENSMUST00000217491 1530 ntBASIC11.44□□□□□ -0.58
Ush2AQ2QI47 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
Ush2AQ2QI47 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ush2AQ2QI47 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.44□□□□□ -0.58
Ush2AQ2QI47 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ush2AQ2QI47 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ush2AQ2QI47 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ush2AQ2QI47 AC117245.4-201ENSMUST00000217388 1646 ntBASIC11.44□□□□□ -0.58
Ush2AQ2QI47 Gm15565-201ENSMUST00000118890 427 ntBASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Gm11643-201ENSMUST00000119578 864 ntBASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ush2AQ2QI47 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Ush2AQ2QI47 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ush2AQ2QI47 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ush2AQ2QI47 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC11.42□□□□□ -0.58
Ush2AQ2QI47 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.42□□□□□ -0.58
Ush2AQ2QI47 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ush2AQ2QI47 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ush2AQ2QI47 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms