Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smn1P97801 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smn1P97801 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Smn1P97801 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smn1P97801 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Smn1P97801 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.66■□□□□ 0.42
Smn1P97801 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smn1P97801 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smn1P97801 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smn1P97801 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smn1P97801 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.66■□□□□ 0.42
Smn1P97801 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smn1P97801 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Smn1P97801 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Smn1P97801 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smn1P97801 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smn1P97801 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smn1P97801 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smn1P97801 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smn1P97801 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smn1P97801 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smn1P97801 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smn1P97801 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smn1P97801 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smn1P97801 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smn1P97801 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smn1P97801 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smn1P97801 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Smn1P97801 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smn1P97801 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smn1P97801 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smn1P97801 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.64■□□□□ 0.41
Smn1P97801 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smn1P97801 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smn1P97801 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smn1P97801 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Smn1P97801 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smn1P97801 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smn1P97801 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smn1P97801 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smn1P97801 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smn1P97801 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smn1P97801 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smn1P97801 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smn1P97801 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smn1P97801 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smn1P97801 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smn1P97801 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smn1P97801 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smn1P97801 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smn1P97801 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smn1P97801 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smn1P97801 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smn1P97801 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smn1P97801 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Smn1P97801 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smn1P97801 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smn1P97801 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smn1P97801 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smn1P97801 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smn1P97801 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smn1P97801 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Smn1P97801 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smn1P97801 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Smn1P97801 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smn1P97801 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smn1P97801 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smn1P97801 Iqck-206ENSMUST00000208658 2891 ntBASIC17.6■□□□□ 0.41
Smn1P97801 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smn1P97801 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smn1P97801 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smn1P97801 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smn1P97801 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smn1P97801 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smn1P97801 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smn1P97801 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smn1P97801 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smn1P97801 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smn1P97801 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.59■□□□□ 0.41
Smn1P97801 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smn1P97801 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smn1P97801 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smn1P97801 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smn1P97801 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Smn1P97801 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smn1P97801 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smn1P97801 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.58■□□□□ 0.4
Smn1P97801 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.58■□□□□ 0.4
Smn1P97801 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smn1P97801 Gm27502-201ENSMUST00000183495 199 ntBASIC17.58■□□□□ 0.4
Smn1P97801 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.58■□□□□ 0.4
Smn1P97801 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smn1P97801 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smn1P97801 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smn1P97801 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smn1P97801 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Smn1P97801 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smn1P97801 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Smn1P97801 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smn1P97801 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms