Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim43bP86448 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim43bP86448 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim43bP86448 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim43bP86448 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.13■□□□□ 0.97
Trim43bP86448 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
Trim43bP86448 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim43bP86448 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim43bP86448 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.13■□□□□ 0.97
Trim43bP86448 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim43bP86448 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43bP86448 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43bP86448 Gm13238-201ENSMUST00000117655 780 ntBASIC21.12■□□□□ 0.97
Trim43bP86448 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43bP86448 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Trim43bP86448 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43bP86448 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43bP86448 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43bP86448 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43bP86448 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43bP86448 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43bP86448 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43bP86448 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43bP86448 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43bP86448 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43bP86448 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43bP86448 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trim43bP86448 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trim43bP86448 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43bP86448 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim43bP86448 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43bP86448 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Trim43bP86448 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43bP86448 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43bP86448 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43bP86448 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.09■□□□□ 0.97
Trim43bP86448 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.09■□□□□ 0.97
Trim43bP86448 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim43bP86448 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43bP86448 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim43bP86448 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43bP86448 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43bP86448 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43bP86448 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43bP86448 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim43bP86448 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43bP86448 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.08■□□□□ 0.97
Trim43bP86448 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43bP86448 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Trim43bP86448 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Trim43bP86448 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43bP86448 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.08■□□□□ 0.97
Trim43bP86448 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim43bP86448 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.08■□□□□ 0.96
Trim43bP86448 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trim43bP86448 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Trim43bP86448 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Trim43bP86448 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trim43bP86448 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43bP86448 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim43bP86448 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43bP86448 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.07■□□□□ 0.96
Trim43bP86448 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43bP86448 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43bP86448 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim43bP86448 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim43bP86448 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trim43bP86448 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim43bP86448 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43bP86448 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43bP86448 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.06■□□□□ 0.96
Trim43bP86448 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43bP86448 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43bP86448 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43bP86448 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim43bP86448 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
Trim43bP86448 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43bP86448 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43bP86448 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43bP86448 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43bP86448 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43bP86448 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43bP86448 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43bP86448 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43bP86448 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43bP86448 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.05■□□□□ 0.96
Trim43bP86448 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43bP86448 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43bP86448 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43bP86448 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43bP86448 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43bP86448 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43bP86448 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trim43bP86448 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43bP86448 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43bP86448 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43bP86448 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43bP86448 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim43bP86448 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.04■□□□□ 0.96
Trim43bP86448 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms