Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp9xP70398 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp9xP70398 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp9xP70398 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp9xP70398 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp9xP70398 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.41■□□□□ 0.38
Usp9xP70398 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp9xP70398 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.4■□□□□ 0.38
Usp9xP70398 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp9xP70398 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp9xP70398 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp9xP70398 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp9xP70398 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp9xP70398 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp9xP70398 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.4■□□□□ 0.38
Usp9xP70398 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.4■□□□□ 0.38
Usp9xP70398 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.39■□□□□ 0.38
Usp9xP70398 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp9xP70398 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp9xP70398 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Usp9xP70398 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.39■□□□□ 0.37
Usp9xP70398 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp9xP70398 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.39■□□□□ 0.37
Usp9xP70398 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Usp9xP70398 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp9xP70398 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp9xP70398 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Usp9xP70398 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.38■□□□□ 0.37
Usp9xP70398 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp9xP70398 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp9xP70398 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp9xP70398 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp9xP70398 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp9xP70398 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp9xP70398 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.36■□□□□ 0.37
Usp9xP70398 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.36■□□□□ 0.37
Usp9xP70398 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp9xP70398 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.36■□□□□ 0.37
Usp9xP70398 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp9xP70398 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp9xP70398 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp9xP70398 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp9xP70398 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Usp9xP70398 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp9xP70398 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp9xP70398 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp9xP70398 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp9xP70398 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp9xP70398 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Usp9xP70398 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.35■□□□□ 0.37
Usp9xP70398 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Usp9xP70398 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp9xP70398 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Usp9xP70398 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp9xP70398 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp9xP70398 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp9xP70398 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp9xP70398 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.34■□□□□ 0.37
Usp9xP70398 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp9xP70398 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp9xP70398 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp9xP70398 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Usp9xP70398 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp9xP70398 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp9xP70398 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp9xP70398 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp9xP70398 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp9xP70398 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.32■□□□□ 0.36
Usp9xP70398 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp9xP70398 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp9xP70398 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp9xP70398 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.31■□□□□ 0.36
Usp9xP70398 Gm10653-202ENSMUST00000139570 835 ntBASIC17.31■□□□□ 0.36
Usp9xP70398 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp9xP70398 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp9xP70398 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp9xP70398 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp9xP70398 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp9xP70398 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Usp9xP70398 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp9xP70398 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp9xP70398 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp9xP70398 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp9xP70398 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp9xP70398 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp9xP70398 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Usp9xP70398 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp9xP70398 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp9xP70398 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.3■□□□□ 0.36
Usp9xP70398 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.3■□□□□ 0.36
Usp9xP70398 Gm10252-201ENSMUST00000209541 832 ntBASIC17.3■□□□□ 0.36
Usp9xP70398 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp9xP70398 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp9xP70398 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp9xP70398 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp9xP70398 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Usp9xP70398 Gm22325-201ENSMUST00000158904 308 ntBASIC17.29■□□□□ 0.36
Usp9xP70398 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.29■□□□□ 0.36
Usp9xP70398 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp9xP70398 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms