Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ThraP63058 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.82■□□□□ 0.92
ThraP63058 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ThraP63058 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.81■□□□□ 0.92
ThraP63058 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ThraP63058 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ThraP63058 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ThraP63058 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ThraP63058 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ThraP63058 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ThraP63058 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ThraP63058 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.8■□□□□ 0.92
ThraP63058 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ThraP63058 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ThraP63058 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.8■□□□□ 0.92
ThraP63058 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ThraP63058 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ThraP63058 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
ThraP63058 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ThraP63058 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ThraP63058 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ThraP63058 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ThraP63058 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ThraP63058 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ThraP63058 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ThraP63058 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ThraP63058 Gm40881-201ENSMUST00000223397 166 ntBASIC20.78■□□□□ 0.92
ThraP63058 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ThraP63058 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ThraP63058 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ThraP63058 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.77■□□□□ 0.92
ThraP63058 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ThraP63058 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ThraP63058 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.77■□□□□ 0.92
ThraP63058 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ThraP63058 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.77■□□□□ 0.92
ThraP63058 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ThraP63058 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.77■□□□□ 0.92
ThraP63058 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ThraP63058 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ThraP63058 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ThraP63058 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.76■□□□□ 0.91
ThraP63058 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.76■□□□□ 0.91
ThraP63058 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.76■□□□□ 0.91
ThraP63058 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
ThraP63058 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ThraP63058 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ThraP63058 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ThraP63058 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ThraP63058 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ThraP63058 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ThraP63058 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ThraP63058 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.75■□□□□ 0.91
ThraP63058 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ThraP63058 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
ThraP63058 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ThraP63058 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ThraP63058 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ThraP63058 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.74■□□□□ 0.91
ThraP63058 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ThraP63058 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ThraP63058 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ThraP63058 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ThraP63058 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ThraP63058 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ThraP63058 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ThraP63058 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ThraP63058 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ThraP63058 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ThraP63058 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.73■□□□□ 0.91
ThraP63058 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ThraP63058 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ThraP63058 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ThraP63058 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ThraP63058 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ThraP63058 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.72■□□□□ 0.91
ThraP63058 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ThraP63058 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.72■□□□□ 0.91
ThraP63058 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ThraP63058 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
ThraP63058 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ThraP63058 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ThraP63058 Gm22238-201ENSMUST00000175222 88 ntBASIC20.71■□□□□ 0.91
ThraP63058 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.71■□□□□ 0.91
ThraP63058 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ThraP63058 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ThraP63058 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ThraP63058 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ThraP63058 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ThraP63058 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ThraP63058 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ThraP63058 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ThraP63058 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ThraP63058 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ThraP63058 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ThraP63058 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ThraP63058 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ThraP63058 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ThraP63058 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ThraP63058 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms