Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Lhx1P63006 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Lhx1P63006 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx1P63006 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.35■□□□□ 0.85
Lhx1P63006 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx1P63006 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx1P63006 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx1P63006 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx1P63006 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx1P63006 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx1P63006 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx1P63006 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx1P63006 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lhx1P63006 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lhx1P63006 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lhx1P63006 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lhx1P63006 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lhx1P63006 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lhx1P63006 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lhx1P63006 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lhx1P63006 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Lhx1P63006 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lhx1P63006 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.34■□□□□ 0.85
Lhx1P63006 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lhx1P63006 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lhx1P63006 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Lhx1P63006 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Lhx1P63006 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Lhx1P63006 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lhx1P63006 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lhx1P63006 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.32■□□□□ 0.84
Lhx1P63006 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lhx1P63006 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lhx1P63006 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.32■□□□□ 0.84
Lhx1P63006 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
Lhx1P63006 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lhx1P63006 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Lhx1P63006 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lhx1P63006 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lhx1P63006 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lhx1P63006 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.32■□□□□ 0.84
Lhx1P63006 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
Lhx1P63006 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lhx1P63006 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lhx1P63006 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lhx1P63006 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Lhx1P63006 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.31■□□□□ 0.84
Lhx1P63006 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.31■□□□□ 0.84
Lhx1P63006 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Lhx1P63006 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx1P63006 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.3■□□□□ 0.84
Lhx1P63006 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx1P63006 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Lhx1P63006 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.3■□□□□ 0.84
Lhx1P63006 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx1P63006 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx1P63006 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lhx1P63006 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.29■□□□□ 0.84
Lhx1P63006 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lhx1P63006 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lhx1P63006 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lhx1P63006 Gm21956-201ENSMUST00000179946 522 ntBASIC20.29■□□□□ 0.84
Lhx1P63006 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Lhx1P63006 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Lhx1P63006 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx1P63006 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx1P63006 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.28■□□□□ 0.84
Lhx1P63006 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.28■□□□□ 0.84
Lhx1P63006 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx1P63006 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.28■□□□□ 0.84
Lhx1P63006 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx1P63006 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx1P63006 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx1P63006 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx1P63006 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lhx1P63006 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx1P63006 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx1P63006 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx1P63006 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx1P63006 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lhx1P63006 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.27■□□□□ 0.84
Lhx1P63006 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.27■□□□□ 0.84
Lhx1P63006 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.27■□□□□ 0.84
Lhx1P63006 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Lhx1P63006 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Lhx1P63006 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lhx1P63006 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lhx1P63006 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Lhx1P63006 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx1P63006 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx1P63006 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx1P63006 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx1P63006 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Lhx1P63006 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx1P63006 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx1P63006 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.26■□□□□ 0.83
Lhx1P63006 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.26■□□□□ 0.83
Lhx1P63006 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx1P63006 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lhx1P63006 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms