Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rps28P62858 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rps28P62858 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rps28P62858 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rps28P62858 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rps28P62858 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rps28P62858 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rps28P62858 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rps28P62858 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rps28P62858 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rps28P62858 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rps28P62858 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rps28P62858 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rps28P62858 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rps28P62858 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC12.38□□□□□ -0.43
Rps28P62858 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rps28P62858 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rps28P62858 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rps28P62858 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rps28P62858 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rps28P62858 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rps28P62858 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rps28P62858 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rps28P62858 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rps28P62858 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rps28P62858 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rps28P62858 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rps28P62858 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.37□□□□□ -0.43
Rps28P62858 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rps28P62858 Gm25239-201ENSMUST00000174915 86 ntBASIC12.37□□□□□ -0.43
Rps28P62858 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rps28P62858 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rps28P62858 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC12.37□□□□□ -0.43
Rps28P62858 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rps28P62858 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rps28P62858 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rps28P62858 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC12.37□□□□□ -0.43
Rps28P62858 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rps28P62858 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rps28P62858 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rps28P62858 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rps28P62858 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rps28P62858 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rps28P62858 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rps28P62858 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rps28P62858 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC12.36□□□□□ -0.43
Rps28P62858 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rps28P62858 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rps28P62858 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rps28P62858 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rps28P62858 Fst-202ENSMUST00000223640 2612 ntBASIC12.36□□□□□ -0.43
Rps28P62858 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rps28P62858 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC12.35□□□□□ -0.43
Rps28P62858 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.35□□□□□ -0.43
Rps28P62858 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rps28P62858 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rps28P62858 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rps28P62858 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Rps28P62858 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.34□□□□□ -0.43
Rps28P62858 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rps28P62858 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.34□□□□□ -0.43
Rps28P62858 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rps28P62858 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rps28P62858 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rps28P62858 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rps28P62858 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rps28P62858 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rps28P62858 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.33□□□□□ -0.44
Rps28P62858 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rps28P62858 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rps28P62858 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rps28P62858 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rps28P62858 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rps28P62858 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms