Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube2d3P61079 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube2d3P61079 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube2d3P61079 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.73□□□□□ -0.05
Ube2d3P61079 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube2d3P61079 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube2d3P61079 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ube2d3P61079 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube2d3P61079 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
Ube2d3P61079 Gm10420-201ENSMUST00000121713 882 ntBASIC14.72□□□□□ -0.05
Ube2d3P61079 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.72□□□□□ -0.05
Ube2d3P61079 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube2d3P61079 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube2d3P61079 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ube2d3P61079 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ube2d3P61079 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube2d3P61079 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube2d3P61079 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube2d3P61079 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube2d3P61079 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.71□□□□□ -0.05
Ube2d3P61079 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
Ube2d3P61079 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ube2d3P61079 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ube2d3P61079 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ube2d3P61079 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ube2d3P61079 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.71□□□□□ -0.05
Ube2d3P61079 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube2d3P61079 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ube2d3P61079 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.71□□□□□ -0.05
Ube2d3P61079 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Ube2d3P61079 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ube2d3P61079 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.71□□□□□ -0.06
Ube2d3P61079 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ube2d3P61079 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube2d3P61079 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube2d3P61079 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube2d3P61079 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube2d3P61079 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube2d3P61079 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube2d3P61079 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube2d3P61079 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube2d3P61079 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ube2d3P61079 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ube2d3P61079 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ube2d3P61079 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ube2d3P61079 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.69□□□□□ -0.06
Ube2d3P61079 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube2d3P61079 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube2d3P61079 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube2d3P61079 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.68□□□□□ -0.06
Ube2d3P61079 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.68□□□□□ -0.06
Ube2d3P61079 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ube2d3P61079 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.68□□□□□ -0.06
Ube2d3P61079 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube2d3P61079 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.68□□□□□ -0.06
Ube2d3P61079 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.68□□□□□ -0.06
Ube2d3P61079 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube2d3P61079 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube2d3P61079 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ube2d3P61079 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube2d3P61079 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube2d3P61079 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube2d3P61079 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ube2d3P61079 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ube2d3P61079 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Ube2d3P61079 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ube2d3P61079 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ube2d3P61079 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ube2d3P61079 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube2d3P61079 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ube2d3P61079 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ube2d3P61079 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Ube2d3P61079 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube2d3P61079 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ube2d3P61079 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube2d3P61079 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.66□□□□□ -0.06
Ube2d3P61079 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.66□□□□□ -0.06
Ube2d3P61079 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube2d3P61079 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube2d3P61079 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ube2d3P61079 Golph3-202ENSMUST00000226517 2359 ntBASIC14.66□□□□□ -0.06
Ube2d3P61079 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ube2d3P61079 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube2d3P61079 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ube2d3P61079 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ube2d3P61079 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube2d3P61079 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube2d3P61079 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.64□□□□□ -0.07
Ube2d3P61079 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ube2d3P61079 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms