Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ythdf1P59326 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ythdf1P59326 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ythdf1P59326 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ythdf1P59326 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ythdf1P59326 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ythdf1P59326 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ythdf1P59326 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ythdf1P59326 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ythdf1P59326 Mir3960-201ENSMUST00000198213 73 ntBASIC19.96■□□□□ 0.79
Ythdf1P59326 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ythdf1P59326 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ythdf1P59326 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ythdf1P59326 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ythdf1P59326 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ythdf1P59326 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ythdf1P59326 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ythdf1P59326 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.95■□□□□ 0.78
Ythdf1P59326 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ythdf1P59326 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ythdf1P59326 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ythdf1P59326 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.95■□□□□ 0.78
Ythdf1P59326 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ythdf1P59326 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ythdf1P59326 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ythdf1P59326 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ythdf1P59326 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ythdf1P59326 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ythdf1P59326 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ythdf1P59326 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Ythdf1P59326 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ythdf1P59326 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.94■□□□□ 0.78
Ythdf1P59326 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ythdf1P59326 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ythdf1P59326 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.94■□□□□ 0.78
Ythdf1P59326 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ythdf1P59326 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ythdf1P59326 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ythdf1P59326 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ythdf1P59326 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ythdf1P59326 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ythdf1P59326 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ythdf1P59326 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ythdf1P59326 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ythdf1P59326 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ythdf1P59326 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ythdf1P59326 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ythdf1P59326 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ythdf1P59326 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ythdf1P59326 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ythdf1P59326 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ythdf1P59326 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ythdf1P59326 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ythdf1P59326 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ythdf1P59326 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ythdf1P59326 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ythdf1P59326 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ythdf1P59326 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ythdf1P59326 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ythdf1P59326 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ythdf1P59326 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ythdf1P59326 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ythdf1P59326 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ythdf1P59326 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ythdf1P59326 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.9■□□□□ 0.78
Ythdf1P59326 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ythdf1P59326 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ythdf1P59326 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ythdf1P59326 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ythdf1P59326 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ythdf1P59326 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.89■□□□□ 0.77
Ythdf1P59326 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.89■□□□□ 0.77
Ythdf1P59326 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.89■□□□□ 0.77
Ythdf1P59326 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ythdf1P59326 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ythdf1P59326 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ythdf1P59326 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ythdf1P59326 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ythdf1P59326 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ythdf1P59326 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.88■□□□□ 0.77
Ythdf1P59326 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ythdf1P59326 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ythdf1P59326 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Ythdf1P59326 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ythdf1P59326 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.88■□□□□ 0.77
Ythdf1P59326 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.88■□□□□ 0.77
Ythdf1P59326 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ythdf1P59326 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ythdf1P59326 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ythdf1P59326 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.87■□□□□ 0.77
Ythdf1P59326 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ythdf1P59326 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ythdf1P59326 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ythdf1P59326 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.87■□□□□ 0.77
Ythdf1P59326 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.87■□□□□ 0.77
Ythdf1P59326 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Ythdf1P59326 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ythdf1P59326 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.87■□□□□ 0.77
Ythdf1P59326 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ythdf1P59326 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms