Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox1P53783 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox1P53783 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox1P53783 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox1P53783 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox1P53783 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox1P53783 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.43■■□□□ 1.02
Sox1P53783 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox1P53783 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Sox1P53783 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox1P53783 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox1P53783 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox1P53783 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sox1P53783 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox1P53783 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.42■■□□□ 1.02
Sox1P53783 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Sox1P53783 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Sox1P53783 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox1P53783 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sox1P53783 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sox1P53783 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sox1P53783 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
Sox1P53783 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.41■■□□□ 1.02
Sox1P53783 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox1P53783 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.41■■□□□ 1.02
Sox1P53783 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox1P53783 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Sox1P53783 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox1P53783 Smad6-203ENSMUST00000179458 273 ntBASIC21.4■■□□□ 1.02
Sox1P53783 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox1P53783 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Sox1P53783 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox1P53783 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox1P53783 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.39■■□□□ 1.01
Sox1P53783 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox1P53783 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.39■■□□□ 1.01
Sox1P53783 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox1P53783 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox1P53783 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox1P53783 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Sox1P53783 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox1P53783 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.38■■□□□ 1.01
Sox1P53783 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox1P53783 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.38■■□□□ 1.01
Sox1P53783 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sox1P53783 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Sox1P53783 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.38■■□□□ 1.01
Sox1P53783 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox1P53783 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox1P53783 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox1P53783 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sox1P53783 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox1P53783 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Sox1P53783 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sox1P53783 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox1P53783 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox1P53783 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox1P53783 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox1P53783 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Sox1P53783 Gm20760-201ENSMUST00000179197 648 ntBASIC21.35■■□□□ 1.01
Sox1P53783 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.35■■□□□ 1.01
Sox1P53783 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox1P53783 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Sox1P53783 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sox1P53783 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.34■■□□□ 1.01
Sox1P53783 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
Sox1P53783 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sox1P53783 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox1P53783 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sox1P53783 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Sox1P53783 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Sox1P53783 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox1P53783 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.33■■□□□ 1.01
Sox1P53783 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sox1P53783 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox1P53783 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Sox1P53783 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Sox1P53783 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.32■■□□□ 1
Sox1P53783 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.32■■□□□ 1
Sox1P53783 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox1P53783 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.32■■□□□ 1
Sox1P53783 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.32■■□□□ 1
Sox1P53783 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox1P53783 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox1P53783 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.31■■□□□ 1
Sox1P53783 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.31■■□□□ 1
Sox1P53783 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sox1P53783 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.31■■□□□ 1
Sox1P53783 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox1P53783 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.31■■□□□ 1
Sox1P53783 Gm8520-201ENSMUST00000186517 868 ntBASIC21.31■■□□□ 1
Sox1P53783 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sox1P53783 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.31■■□□□ 1
Sox1P53783 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Sox1P53783 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sox1P53783 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.3■■□□□ 1
Sox1P53783 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox1P53783 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sox1P53783 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox1P53783 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms