Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.29■□□□□ 0.84
Limk1P53668 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Limk1P53668 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Limk1P53668 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Limk1P53668 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Limk1P53668 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Limk1P53668 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Limk1P53668 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.28■□□□□ 0.84
Limk1P53668 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.28■□□□□ 0.84
Limk1P53668 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Limk1P53668 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Limk1P53668 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Limk1P53668 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Limk1P53668 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Limk1P53668 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Limk1P53668 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.27■□□□□ 0.84
Limk1P53668 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Limk1P53668 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Limk1P53668 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.27■□□□□ 0.83
Limk1P53668 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Limk1P53668 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk1P53668 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk1P53668 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Limk1P53668 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk1P53668 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Limk1P53668 Gm42569-201ENSMUST00000200539 472 ntBASIC20.26■□□□□ 0.83
Limk1P53668 Gm43173-201ENSMUST00000202246 593 ntBASIC20.26■□□□□ 0.83
Limk1P53668 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk1P53668 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.26■□□□□ 0.83
Limk1P53668 Gm10493-201ENSMUST00000097270 612 ntBASIC20.26■□□□□ 0.83
Limk1P53668 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Limk1P53668 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk1P53668 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk1P53668 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Limk1P53668 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Limk1P53668 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Limk1P53668 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.25■□□□□ 0.83
Limk1P53668 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Limk1P53668 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.25■□□□□ 0.83
Limk1P53668 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Limk1P53668 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Limk1P53668 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Limk1P53668 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Limk1P53668 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Limk1P53668 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Limk1P53668 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Limk1P53668 Gm26571-201ENSMUST00000181399 666 ntBASIC20.24■□□□□ 0.83
Limk1P53668 Gm27011-201ENSMUST00000182352 972 ntBASIC20.24■□□□□ 0.83
Limk1P53668 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Limk1P53668 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.24■□□□□ 0.83
Limk1P53668 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Limk1P53668 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Limk1P53668 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Limk1P53668 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Limk1P53668 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Limk1P53668 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Limk1P53668 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Limk1P53668 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.23■□□□□ 0.83
Limk1P53668 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Limk1P53668 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Limk1P53668 Gm10849-201ENSMUST00000100397 618 ntBASIC20.23■□□□□ 0.83
Limk1P53668 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.23■□□□□ 0.83
Limk1P53668 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.23■□□□□ 0.83
Limk1P53668 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.23■□□□□ 0.83
Limk1P53668 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Limk1P53668 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Limk1P53668 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Limk1P53668 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Limk1P53668 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.23■□□□□ 0.83
Limk1P53668 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Limk1P53668 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Limk1P53668 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Limk1P53668 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.22■□□□□ 0.83
Limk1P53668 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.22■□□□□ 0.83
Limk1P53668 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Limk1P53668 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.22■□□□□ 0.83
Limk1P53668 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Limk1P53668 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Limk1P53668 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Limk1P53668 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.22■□□□□ 0.83
Limk1P53668 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Limk1P53668 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Limk1P53668 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Limk1P53668 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.21■□□□□ 0.83
Limk1P53668 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Limk1P53668 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Limk1P53668 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 Gm37179-201ENSMUST00000194862 823 ntBASIC20.2■□□□□ 0.82
Limk1P53668 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Limk1P53668 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Limk1P53668 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms