Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdx1P52946 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdx1P52946 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pdx1P52946 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdx1P52946 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.47■□□□□ 0.87
Pdx1P52946 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.47■□□□□ 0.87
Pdx1P52946 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.47■□□□□ 0.87
Pdx1P52946 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.47■□□□□ 0.87
Pdx1P52946 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdx1P52946 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdx1P52946 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdx1P52946 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdx1P52946 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdx1P52946 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdx1P52946 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdx1P52946 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdx1P52946 Gm14117-201ENSMUST00000122417 843 ntBASIC20.46■□□□□ 0.87
Pdx1P52946 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.46■□□□□ 0.87
Pdx1P52946 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.46■□□□□ 0.87
Pdx1P52946 Gm45102-201ENSMUST00000207427 857 ntBASIC20.46■□□□□ 0.87
Pdx1P52946 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdx1P52946 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdx1P52946 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Pdx1P52946 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdx1P52946 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.46■□□□□ 0.87
Pdx1P52946 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.87
Pdx1P52946 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Pdx1P52946 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdx1P52946 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.45■□□□□ 0.86
Pdx1P52946 Gm7417-201ENSMUST00000192950 473 ntBASIC20.45■□□□□ 0.86
Pdx1P52946 Rps24-207ENSMUST00000224568 714 ntBASIC20.45■□□□□ 0.86
Pdx1P52946 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdx1P52946 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdx1P52946 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdx1P52946 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdx1P52946 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdx1P52946 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pdx1P52946 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdx1P52946 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pdx1P52946 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdx1P52946 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdx1P52946 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.43■□□□□ 0.86
Pdx1P52946 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.43■□□□□ 0.86
Pdx1P52946 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.43■□□□□ 0.86
Pdx1P52946 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdx1P52946 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdx1P52946 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdx1P52946 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdx1P52946 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdx1P52946 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.43■□□□□ 0.86
Pdx1P52946 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdx1P52946 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdx1P52946 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdx1P52946 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdx1P52946 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.42■□□□□ 0.86
Pdx1P52946 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdx1P52946 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdx1P52946 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Pdx1P52946 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdx1P52946 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pdx1P52946 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdx1P52946 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdx1P52946 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pdx1P52946 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdx1P52946 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdx1P52946 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.4■□□□□ 0.86
Pdx1P52946 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.4■□□□□ 0.86
Pdx1P52946 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pdx1P52946 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdx1P52946 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdx1P52946 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdx1P52946 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pdx1P52946 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdx1P52946 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pdx1P52946 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.39■□□□□ 0.85
Pdx1P52946 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pdx1P52946 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdx1P52946 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pdx1P52946 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdx1P52946 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdx1P52946 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Pdx1P52946 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdx1P52946 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdx1P52946 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdx1P52946 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdx1P52946 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdx1P52946 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdx1P52946 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pdx1P52946 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pdx1P52946 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdx1P52946 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pdx1P52946 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdx1P52946 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.36■□□□□ 0.85
Pdx1P52946 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdx1P52946 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pdx1P52946 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdx1P52946 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdx1P52946 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pdx1P52946 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdx1P52946 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms