Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.87■□□□□ 0.77
Ube2e3P52483 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.87■□□□□ 0.77
Ube2e3P52483 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.87■□□□□ 0.77
Ube2e3P52483 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.87■□□□□ 0.77
Ube2e3P52483 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube2e3P52483 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube2e3P52483 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube2e3P52483 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube2e3P52483 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ube2e3P52483 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.86■□□□□ 0.77
Ube2e3P52483 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.86■□□□□ 0.77
Ube2e3P52483 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube2e3P52483 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube2e3P52483 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube2e3P52483 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.86■□□□□ 0.77
Ube2e3P52483 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube2e3P52483 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube2e3P52483 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ube2e3P52483 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube2e3P52483 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ube2e3P52483 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.85■□□□□ 0.77
Ube2e3P52483 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube2e3P52483 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube2e3P52483 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ube2e3P52483 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube2e3P52483 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube2e3P52483 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube2e3P52483 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube2e3P52483 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.83■□□□□ 0.77
Ube2e3P52483 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.83■□□□□ 0.77
Ube2e3P52483 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube2e3P52483 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Ube2e3P52483 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ube2e3P52483 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ube2e3P52483 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube2e3P52483 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Ube2e3P52483 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ube2e3P52483 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube2e3P52483 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.82■□□□□ 0.76
Ube2e3P52483 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube2e3P52483 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube2e3P52483 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube2e3P52483 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.81■□□□□ 0.76
Ube2e3P52483 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Ube2e3P52483 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ube2e3P52483 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube2e3P52483 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube2e3P52483 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ube2e3P52483 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ube2e3P52483 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube2e3P52483 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube2e3P52483 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube2e3P52483 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube2e3P52483 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.8■□□□□ 0.76
Ube2e3P52483 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube2e3P52483 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube2e3P52483 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.8■□□□□ 0.76
Ube2e3P52483 Gm5812-201ENSMUST00000061073 957 ntBASIC19.8■□□□□ 0.76
Ube2e3P52483 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube2e3P52483 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube2e3P52483 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ube2e3P52483 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube2e3P52483 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube2e3P52483 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube2e3P52483 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube2e3P52483 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube2e3P52483 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube2e3P52483 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube2e3P52483 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube2e3P52483 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ube2e3P52483 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.78■□□□□ 0.76
Ube2e3P52483 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.78■□□□□ 0.76
Ube2e3P52483 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.78■□□□□ 0.76
Ube2e3P52483 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Ube2e3P52483 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ube2e3P52483 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube2e3P52483 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube2e3P52483 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube2e3P52483 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ube2e3P52483 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.77■□□□□ 0.76
Ube2e3P52483 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.77■□□□□ 0.76
Ube2e3P52483 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.77■□□□□ 0.76
Ube2e3P52483 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.77■□□□□ 0.76
Ube2e3P52483 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube2e3P52483 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ube2e3P52483 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Ube2e3P52483 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube2e3P52483 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ube2e3P52483 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.76■□□□□ 0.75
Ube2e3P52483 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ube2e3P52483 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ube2e3P52483 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube2e3P52483 Gm15820-201ENSMUST00000201566 728 ntBASIC19.76■□□□□ 0.75
Ube2e3P52483 Gm40881-201ENSMUST00000223397 166 ntBASIC19.76■□□□□ 0.75
Ube2e3P52483 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube2e3P52483 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube2e3P52483 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube2e3P52483 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube2e3P52483 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube2e3P52483 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms