Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx3P50481 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx3P50481 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx3P50481 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx3P50481 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.09■□□□□ 0.97
Lhx3P50481 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.09■□□□□ 0.97
Lhx3P50481 Gm7143-201ENSMUST00000222811 859 ntBASIC21.09■□□□□ 0.97
Lhx3P50481 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Lhx3P50481 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx3P50481 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.09■□□□□ 0.97
Lhx3P50481 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx3P50481 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx3P50481 Gm9870-201ENSMUST00000063874 645 ntBASIC21.08■□□□□ 0.97
Lhx3P50481 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lhx3P50481 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lhx3P50481 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.07■□□□□ 0.96
Lhx3P50481 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx3P50481 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Lhx3P50481 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.07■□□□□ 0.96
Lhx3P50481 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx3P50481 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx3P50481 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx3P50481 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx3P50481 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx3P50481 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx3P50481 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx3P50481 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Lhx3P50481 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx3P50481 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Lhx3P50481 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx3P50481 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx3P50481 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx3P50481 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx3P50481 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Lhx3P50481 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx3P50481 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx3P50481 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx3P50481 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx3P50481 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx3P50481 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx3P50481 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx3P50481 Gm12922-201ENSMUST00000120626 809 ntBASIC21.04■□□□□ 0.96
Lhx3P50481 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx3P50481 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.04■□□□□ 0.96
Lhx3P50481 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx3P50481 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx3P50481 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Lhx3P50481 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
Lhx3P50481 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx3P50481 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lhx3P50481 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Lhx3P50481 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx3P50481 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx3P50481 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.03■□□□□ 0.96
Lhx3P50481 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx3P50481 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx3P50481 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.03■□□□□ 0.96
Lhx3P50481 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx3P50481 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.03■□□□□ 0.96
Lhx3P50481 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx3P50481 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx3P50481 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Lhx3P50481 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.02■□□□□ 0.96
Lhx3P50481 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.02■□□□□ 0.96
Lhx3P50481 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx3P50481 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx3P50481 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.01■□□□□ 0.95
Lhx3P50481 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx3P50481 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx3P50481 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.01■□□□□ 0.95
Lhx3P50481 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx3P50481 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.01■□□□□ 0.95
Lhx3P50481 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx3P50481 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.01■□□□□ 0.95
Lhx3P50481 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx3P50481 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx3P50481 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx3P50481 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lhx3P50481 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Lhx3P50481 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx3P50481 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx3P50481 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx3P50481 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21■□□□□ 0.95
Lhx3P50481 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lhx3P50481 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Lhx3P50481 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21■□□□□ 0.95
Lhx3P50481 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21■□□□□ 0.95
Lhx3P50481 Gm9847-201ENSMUST00000052528 599 ntBASIC21■□□□□ 0.95
Lhx3P50481 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Lhx3P50481 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lhx3P50481 Gm12504-201ENSMUST00000120860 2231 ntBASIC21■□□□□ 0.95
Lhx3P50481 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx3P50481 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lhx3P50481 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
Lhx3P50481 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx3P50481 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.99■□□□□ 0.95
Lhx3P50481 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.99■□□□□ 0.95
Lhx3P50481 Golgb1-201ENSMUST00000023534 498 ntBASIC20.99■□□□□ 0.95
Lhx3P50481 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx3P50481 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms