Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm14117-201ENSMUST00000122417 843 ntBASIC19.14■□□□□ 0.65
Foxa1P35582 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Foxa1P35582 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Foxa1P35582 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Foxa1P35582 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Foxa1P35582 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.13■□□□□ 0.65
Foxa1P35582 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.13■□□□□ 0.65
Foxa1P35582 Gm45102-201ENSMUST00000207427 857 ntBASIC19.13■□□□□ 0.65
Foxa1P35582 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.13■□□□□ 0.65
Foxa1P35582 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Foxa1P35582 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Foxa1P35582 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Foxa1P35582 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxa1P35582 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxa1P35582 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxa1P35582 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxa1P35582 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxa1P35582 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Foxa1P35582 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.12■□□□□ 0.65
Foxa1P35582 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Foxa1P35582 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.12■□□□□ 0.65
Foxa1P35582 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Foxa1P35582 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Foxa1P35582 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Foxa1P35582 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Foxa1P35582 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Foxa1P35582 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Foxa1P35582 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.11■□□□□ 0.65
Foxa1P35582 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Foxa1P35582 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Foxa1P35582 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Foxa1P35582 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Foxa1P35582 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.11■□□□□ 0.65
Foxa1P35582 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Foxa1P35582 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxa1P35582 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxa1P35582 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Foxa1P35582 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxa1P35582 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxa1P35582 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxa1P35582 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.1■□□□□ 0.65
Foxa1P35582 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Foxa1P35582 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Foxa1P35582 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Foxa1P35582 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Foxa1P35582 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Foxa1P35582 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Foxa1P35582 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Foxa1P35582 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
Foxa1P35582 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.08■□□□□ 0.64
Foxa1P35582 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.08■□□□□ 0.64
Foxa1P35582 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Foxa1P35582 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Foxa1P35582 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Foxa1P35582 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxa1P35582 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxa1P35582 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxa1P35582 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Foxa1P35582 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxa1P35582 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.07■□□□□ 0.64
Foxa1P35582 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxa1P35582 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxa1P35582 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxa1P35582 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Foxa1P35582 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Foxa1P35582 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Foxa1P35582 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.06■□□□□ 0.64
Foxa1P35582 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxa1P35582 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxa1P35582 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.06■□□□□ 0.64
Foxa1P35582 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxa1P35582 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxa1P35582 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxa1P35582 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Foxa1P35582 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxa1P35582 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Foxa1P35582 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Foxa1P35582 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxa1P35582 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.05■□□□□ 0.64
Foxa1P35582 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxa1P35582 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.05■□□□□ 0.64
Foxa1P35582 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxa1P35582 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxa1P35582 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Foxa1P35582 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.05■□□□□ 0.64
Foxa1P35582 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Foxa1P35582 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxa1P35582 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxa1P35582 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxa1P35582 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxa1P35582 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Foxa1P35582 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxa1P35582 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxa1P35582 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Foxa1P35582 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Foxa1P35582 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxa1P35582 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Foxa1P35582 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
Foxa1P35582 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Foxa1P35582 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms