Protein–RNA interactions for Protein: P33610

Prim2, DNA primase large subunit, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim2P33610 Gm5921-201ENSMUST00000075898 882 ntBASIC20.27■□□□□ 0.84
Prim2P33610 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim2P33610 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim2P33610 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.26■□□□□ 0.83
Prim2P33610 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim2P33610 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim2P33610 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prim2P33610 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim2P33610 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim2P33610 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim2P33610 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prim2P33610 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Prim2P33610 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim2P33610 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.25■□□□□ 0.83
Prim2P33610 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prim2P33610 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim2P33610 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prim2P33610 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prim2P33610 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim2P33610 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim2P33610 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim2P33610 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim2P33610 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim2P33610 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prim2P33610 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim2P33610 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim2P33610 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim2P33610 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim2P33610 Gm45444-201ENSMUST00000211394 898 ntBASIC20.23■□□□□ 0.83
Prim2P33610 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim2P33610 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prim2P33610 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Prim2P33610 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prim2P33610 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Prim2P33610 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.22■□□□□ 0.83
Prim2P33610 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prim2P33610 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prim2P33610 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.22■□□□□ 0.83
Prim2P33610 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Prim2P33610 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.22■□□□□ 0.83
Prim2P33610 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Prim2P33610 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim2P33610 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prim2P33610 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim2P33610 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prim2P33610 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim2P33610 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prim2P33610 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prim2P33610 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prim2P33610 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.21■□□□□ 0.83
Prim2P33610 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Prim2P33610 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Prim2P33610 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prim2P33610 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prim2P33610 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prim2P33610 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.2■□□□□ 0.82
Prim2P33610 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prim2P33610 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prim2P33610 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.2■□□□□ 0.82
Prim2P33610 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prim2P33610 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prim2P33610 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Prim2P33610 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prim2P33610 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prim2P33610 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prim2P33610 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prim2P33610 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Prim2P33610 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prim2P33610 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Prim2P33610 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prim2P33610 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Prim2P33610 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prim2P33610 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prim2P33610 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Prim2P33610 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prim2P33610 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prim2P33610 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prim2P33610 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prim2P33610 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prim2P33610 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prim2P33610 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prim2P33610 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prim2P33610 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prim2P33610 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prim2P33610 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Prim2P33610 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prim2P33610 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prim2P33610 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prim2P33610 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prim2P33610 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prim2P33610 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prim2P33610 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.16■□□□□ 0.82
Prim2P33610 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Prim2P33610 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prim2P33610 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prim2P33610 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Prim2P33610 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prim2P33610 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.16■□□□□ 0.82
Prim2P33610 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Prim2P33610 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms