Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a11P31650 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.53■□□□□ 0.72
Slc6a11P31650 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Slc6a11P31650 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a11P31650 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Slc6a11P31650 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a11P31650 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc6a11P31650 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a11P31650 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a11P31650 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.53■□□□□ 0.72
Slc6a11P31650 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a11P31650 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Slc6a11P31650 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slc6a11P31650 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Slc6a11P31650 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Slc6a11P31650 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slc6a11P31650 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a11P31650 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a11P31650 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.51■□□□□ 0.71
Slc6a11P31650 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a11P31650 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a11P31650 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.51■□□□□ 0.71
Slc6a11P31650 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a11P31650 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.51■□□□□ 0.71
Slc6a11P31650 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a11P31650 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a11P31650 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a11P31650 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a11P31650 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a11P31650 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a11P31650 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a11P31650 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.5■□□□□ 0.71
Slc6a11P31650 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Slc6a11P31650 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a11P31650 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a11P31650 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a11P31650 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a11P31650 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a11P31650 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a11P31650 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.49■□□□□ 0.71
Slc6a11P31650 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a11P31650 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a11P31650 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a11P31650 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a11P31650 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Slc6a11P31650 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a11P31650 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Slc6a11P31650 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Slc6a11P31650 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a11P31650 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a11P31650 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Slc6a11P31650 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.48■□□□□ 0.71
Slc6a11P31650 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.48■□□□□ 0.71
Slc6a11P31650 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a11P31650 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a11P31650 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a11P31650 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a11P31650 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a11P31650 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a11P31650 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a11P31650 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a11P31650 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Slc6a11P31650 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a11P31650 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a11P31650 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a11P31650 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Slc6a11P31650 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a11P31650 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a11P31650 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.46■□□□□ 0.71
Slc6a11P31650 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a11P31650 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a11P31650 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a11P31650 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a11P31650 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a11P31650 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a11P31650 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a11P31650 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Slc6a11P31650 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.45■□□□□ 0.7
Slc6a11P31650 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a11P31650 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a11P31650 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a11P31650 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a11P31650 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a11P31650 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a11P31650 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Slc6a11P31650 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a11P31650 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a11P31650 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a11P31650 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a11P31650 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a11P31650 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a11P31650 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a11P31650 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a11P31650 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slc6a11P31650 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a11P31650 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a11P31650 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a11P31650 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a11P31650 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a11P31650 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms