Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nedd8P29595 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nedd8P29595 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nedd8P29595 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Nedd8P29595 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nedd8P29595 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nedd8P29595 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Nedd8P29595 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.06■□□□□ 0.64
Nedd8P29595 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nedd8P29595 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Nedd8P29595 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nedd8P29595 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Nedd8P29595 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nedd8P29595 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nedd8P29595 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Nedd8P29595 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nedd8P29595 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nedd8P29595 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nedd8P29595 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nedd8P29595 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.05■□□□□ 0.64
Nedd8P29595 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nedd8P29595 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nedd8P29595 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Nedd8P29595 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Nedd8P29595 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nedd8P29595 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nedd8P29595 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Nedd8P29595 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nedd8P29595 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nedd8P29595 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.04■□□□□ 0.64
Nedd8P29595 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Nedd8P29595 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Nedd8P29595 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nedd8P29595 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nedd8P29595 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.04■□□□□ 0.64
Nedd8P29595 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nedd8P29595 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nedd8P29595 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Nedd8P29595 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.03■□□□□ 0.64
Nedd8P29595 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.03■□□□□ 0.64
Nedd8P29595 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nedd8P29595 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nedd8P29595 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.03■□□□□ 0.64
Nedd8P29595 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.03■□□□□ 0.64
Nedd8P29595 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nedd8P29595 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.03■□□□□ 0.64
Nedd8P29595 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nedd8P29595 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nedd8P29595 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.03■□□□□ 0.64
Nedd8P29595 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nedd8P29595 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nedd8P29595 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nedd8P29595 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Nedd8P29595 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.02■□□□□ 0.64
Nedd8P29595 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nedd8P29595 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nedd8P29595 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nedd8P29595 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.02■□□□□ 0.64
Nedd8P29595 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nedd8P29595 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nedd8P29595 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nedd8P29595 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nedd8P29595 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nedd8P29595 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Nedd8P29595 Gm9812-201ENSMUST00000061934 968 ntBASIC19.01■□□□□ 0.63
Nedd8P29595 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nedd8P29595 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nedd8P29595 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nedd8P29595 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.01■□□□□ 0.63
Nedd8P29595 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nedd8P29595 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nedd8P29595 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.01■□□□□ 0.63
Nedd8P29595 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nedd8P29595 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nedd8P29595 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nedd8P29595 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nedd8P29595 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nedd8P29595 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19■□□□□ 0.63
Nedd8P29595 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19■□□□□ 0.63
Nedd8P29595 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nedd8P29595 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nedd8P29595 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nedd8P29595 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nedd8P29595 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nedd8P29595 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nedd8P29595 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nedd8P29595 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nedd8P29595 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nedd8P29595 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nedd8P29595 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nedd8P29595 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nedd8P29595 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.98■□□□□ 0.63
Nedd8P29595 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.98■□□□□ 0.63
Nedd8P29595 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
Nedd8P29595 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nedd8P29595 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nedd8P29595 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.97■□□□□ 0.63
Nedd8P29595 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nedd8P29595 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nedd8P29595 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms