Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RxrbP28704 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RxrbP28704 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RxrbP28704 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RxrbP28704 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RxrbP28704 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RxrbP28704 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RxrbP28704 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RxrbP28704 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RxrbP28704 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RxrbP28704 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RxrbP28704 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RxrbP28704 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RxrbP28704 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RxrbP28704 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RxrbP28704 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RxrbP28704 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RxrbP28704 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.8■□□□□ 0.92
RxrbP28704 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RxrbP28704 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RxrbP28704 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RxrbP28704 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RxrbP28704 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.8■□□□□ 0.92
RxrbP28704 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.8■□□□□ 0.92
RxrbP28704 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RxrbP28704 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RxrbP28704 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.8■□□□□ 0.92
RxrbP28704 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.79■□□□□ 0.92
RxrbP28704 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RxrbP28704 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RxrbP28704 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RxrbP28704 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
RxrbP28704 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RxrbP28704 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.79■□□□□ 0.92
RxrbP28704 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RxrbP28704 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RxrbP28704 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RxrbP28704 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RxrbP28704 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RxrbP28704 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RxrbP28704 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RxrbP28704 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RxrbP28704 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RxrbP28704 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RxrbP28704 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RxrbP28704 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RxrbP28704 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RxrbP28704 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RxrbP28704 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RxrbP28704 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RxrbP28704 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.77■□□□□ 0.92
RxrbP28704 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RxrbP28704 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RxrbP28704 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
RxrbP28704 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RxrbP28704 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RxrbP28704 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RxrbP28704 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RxrbP28704 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.76■□□□□ 0.91
RxrbP28704 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RxrbP28704 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
RxrbP28704 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RxrbP28704 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RxrbP28704 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RxrbP28704 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RxrbP28704 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.75■□□□□ 0.91
RxrbP28704 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RxrbP28704 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.75■□□□□ 0.91
RxrbP28704 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.75■□□□□ 0.91
RxrbP28704 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RxrbP28704 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RxrbP28704 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RxrbP28704 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RxrbP28704 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RxrbP28704 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RxrbP28704 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RxrbP28704 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RxrbP28704 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.74■□□□□ 0.91
RxrbP28704 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.74■□□□□ 0.91
RxrbP28704 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RxrbP28704 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RxrbP28704 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RxrbP28704 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RxrbP28704 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.73■□□□□ 0.91
RxrbP28704 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RxrbP28704 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RxrbP28704 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RxrbP28704 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RxrbP28704 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RxrbP28704 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RxrbP28704 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RxrbP28704 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RxrbP28704 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RxrbP28704 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RxrbP28704 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RxrbP28704 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.72■□□□□ 0.91
RxrbP28704 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RxrbP28704 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RxrbP28704 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RxrbP28704 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms