Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nckap1P28660 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nckap1P28660 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nckap1P28660 Gm7143-201ENSMUST00000222811 859 ntBASIC20.56■□□□□ 0.88
Nckap1P28660 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nckap1P28660 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.56■□□□□ 0.88
Nckap1P28660 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Nckap1P28660 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Nckap1P28660 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nckap1P28660 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.55■□□□□ 0.88
Nckap1P28660 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nckap1P28660 Serp2-204ENSMUST00000228055 705 ntBASIC20.55■□□□□ 0.88
Nckap1P28660 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nckap1P28660 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.55■□□□□ 0.88
Nckap1P28660 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.55■□□□□ 0.88
Nckap1P28660 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nckap1P28660 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nckap1P28660 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nckap1P28660 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Nckap1P28660 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nckap1P28660 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nckap1P28660 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nckap1P28660 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.53■□□□□ 0.88
Nckap1P28660 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nckap1P28660 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nckap1P28660 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nckap1P28660 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Nckap1P28660 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nckap1P28660 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nckap1P28660 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nckap1P28660 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nckap1P28660 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nckap1P28660 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.52■□□□□ 0.88
Nckap1P28660 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nckap1P28660 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Nckap1P28660 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nckap1P28660 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nckap1P28660 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Nckap1P28660 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.51■□□□□ 0.87
Nckap1P28660 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nckap1P28660 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Nckap1P28660 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.51■□□□□ 0.87
Nckap1P28660 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nckap1P28660 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nckap1P28660 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nckap1P28660 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nckap1P28660 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.5■□□□□ 0.87
Nckap1P28660 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nckap1P28660 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Nckap1P28660 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nckap1P28660 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nckap1P28660 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.5■□□□□ 0.87
Nckap1P28660 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nckap1P28660 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Nckap1P28660 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.49■□□□□ 0.87
Nckap1P28660 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Nckap1P28660 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1P28660 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.49■□□□□ 0.87
Nckap1P28660 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.49■□□□□ 0.87
Nckap1P28660 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nckap1P28660 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1P28660 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1P28660 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1P28660 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1P28660 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Nckap1P28660 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1P28660 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nckap1P28660 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1P28660 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1P28660 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1P28660 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nckap1P28660 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nckap1P28660 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nckap1P28660 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nckap1P28660 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nckap1P28660 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Nckap1P28660 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Nckap1P28660 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.47■□□□□ 0.87
Nckap1P28660 Gm43137-201ENSMUST00000198052 594 ntBASIC20.47■□□□□ 0.87
Nckap1P28660 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nckap1P28660 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nckap1P28660 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nckap1P28660 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nckap1P28660 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nckap1P28660 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.46■□□□□ 0.87
Nckap1P28660 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.46■□□□□ 0.87
Nckap1P28660 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nckap1P28660 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nckap1P28660 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Nckap1P28660 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Nckap1P28660 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.45■□□□□ 0.86
Nckap1P28660 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nckap1P28660 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.45■□□□□ 0.86
Nckap1P28660 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nckap1P28660 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nckap1P28660 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nckap1P28660 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nckap1P28660 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nckap1P28660 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nckap1P28660 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms