Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nfkb1P25799 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nfkb1P25799 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nfkb1P25799 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nfkb1P25799 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.25■□□□□ 0.99
Nfkb1P25799 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nfkb1P25799 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nfkb1P25799 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nfkb1P25799 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nfkb1P25799 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.24■□□□□ 0.99
Nfkb1P25799 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nfkb1P25799 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nfkb1P25799 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.24■□□□□ 0.99
Nfkb1P25799 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.24■□□□□ 0.99
Nfkb1P25799 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.24■□□□□ 0.99
Nfkb1P25799 Gm45417-201ENSMUST00000209533 758 ntBASIC21.24■□□□□ 0.99
Nfkb1P25799 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.24■□□□□ 0.99
Nfkb1P25799 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.23■□□□□ 0.99
Nfkb1P25799 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nfkb1P25799 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.23■□□□□ 0.99
Nfkb1P25799 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nfkb1P25799 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.23■□□□□ 0.99
Nfkb1P25799 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nfkb1P25799 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nfkb1P25799 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Nfkb1P25799 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Nfkb1P25799 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.23■□□□□ 0.99
Nfkb1P25799 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nfkb1P25799 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nfkb1P25799 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nfkb1P25799 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nfkb1P25799 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nfkb1P25799 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nfkb1P25799 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nfkb1P25799 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nfkb1P25799 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nfkb1P25799 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Nfkb1P25799 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nfkb1P25799 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nfkb1P25799 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Nfkb1P25799 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nfkb1P25799 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nfkb1P25799 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.21■□□□□ 0.99
Nfkb1P25799 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nfkb1P25799 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.21■□□□□ 0.99
Nfkb1P25799 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nfkb1P25799 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nfkb1P25799 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nfkb1P25799 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nfkb1P25799 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nfkb1P25799 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nfkb1P25799 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nfkb1P25799 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nfkb1P25799 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nfkb1P25799 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nfkb1P25799 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Nfkb1P25799 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nfkb1P25799 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nfkb1P25799 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nfkb1P25799 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Nfkb1P25799 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nfkb1P25799 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nfkb1P25799 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Nfkb1P25799 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nfkb1P25799 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Nfkb1P25799 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Nfkb1P25799 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nfkb1P25799 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nfkb1P25799 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nfkb1P25799 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nfkb1P25799 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nfkb1P25799 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nfkb1P25799 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Nfkb1P25799 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nfkb1P25799 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.17■□□□□ 0.98
Nfkb1P25799 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nfkb1P25799 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nfkb1P25799 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nfkb1P25799 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nfkb1P25799 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.17■□□□□ 0.98
Nfkb1P25799 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nfkb1P25799 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Nfkb1P25799 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nfkb1P25799 Gm7143-201ENSMUST00000222811 859 ntBASIC21.16■□□□□ 0.98
Nfkb1P25799 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nfkb1P25799 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nfkb1P25799 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.15■□□□□ 0.98
Nfkb1P25799 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.15■□□□□ 0.98
Nfkb1P25799 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nfkb1P25799 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nfkb1P25799 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nfkb1P25799 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.15■□□□□ 0.98
Nfkb1P25799 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nfkb1P25799 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nfkb1P25799 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nfkb1P25799 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nfkb1P25799 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nfkb1P25799 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nfkb1P25799 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nfkb1P25799 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms