Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cbx3P23198 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cbx3P23198 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cbx3P23198 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cbx3P23198 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cbx3P23198 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.61■□□□□ 0.57
Cbx3P23198 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cbx3P23198 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cbx3P23198 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cbx3P23198 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.61■□□□□ 0.57
Cbx3P23198 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cbx3P23198 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cbx3P23198 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cbx3P23198 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cbx3P23198 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cbx3P23198 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cbx3P23198 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cbx3P23198 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cbx3P23198 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cbx3P23198 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.59■□□□□ 0.57
Cbx3P23198 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cbx3P23198 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.59■□□□□ 0.57
Cbx3P23198 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cbx3P23198 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cbx3P23198 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cbx3P23198 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cbx3P23198 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cbx3P23198 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cbx3P23198 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cbx3P23198 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cbx3P23198 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cbx3P23198 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cbx3P23198 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cbx3P23198 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.57■□□□□ 0.56
Cbx3P23198 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Cbx3P23198 Gm8503-201ENSMUST00000118131 455 ntBASIC18.57■□□□□ 0.56
Cbx3P23198 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.57■□□□□ 0.56
Cbx3P23198 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cbx3P23198 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cbx3P23198 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cbx3P23198 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cbx3P23198 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cbx3P23198 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cbx3P23198 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cbx3P23198 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cbx3P23198 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cbx3P23198 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cbx3P23198 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cbx3P23198 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cbx3P23198 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cbx3P23198 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cbx3P23198 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cbx3P23198 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cbx3P23198 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cbx3P23198 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cbx3P23198 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Cbx3P23198 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cbx3P23198 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cbx3P23198 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cbx3P23198 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cbx3P23198 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cbx3P23198 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cbx3P23198 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Cbx3P23198 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cbx3P23198 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cbx3P23198 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cbx3P23198 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cbx3P23198 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cbx3P23198 Grk6-206ENSMUST00000224995 2971 ntBASIC18.54■□□□□ 0.56
Cbx3P23198 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cbx3P23198 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cbx3P23198 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cbx3P23198 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cbx3P23198 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cbx3P23198 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cbx3P23198 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cbx3P23198 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cbx3P23198 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cbx3P23198 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cbx3P23198 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cbx3P23198 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cbx3P23198 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cbx3P23198 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cbx3P23198 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cbx3P23198 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cbx3P23198 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cbx3P23198 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.52■□□□□ 0.56
Cbx3P23198 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cbx3P23198 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cbx3P23198 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cbx3P23198 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.52■□□□□ 0.56
Cbx3P23198 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cbx3P23198 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Cbx3P23198 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cbx3P23198 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.52■□□□□ 0.55
Cbx3P23198 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cbx3P23198 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cbx3P23198 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cbx3P23198 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cbx3P23198 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 678.9 ms