Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
BdnfP21237 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BdnfP21237 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
BdnfP21237 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
BdnfP21237 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BdnfP21237 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.71■□□□□ 0.75
BdnfP21237 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BdnfP21237 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BdnfP21237 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BdnfP21237 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BdnfP21237 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BdnfP21237 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BdnfP21237 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.74
BdnfP21237 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BdnfP21237 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
BdnfP21237 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BdnfP21237 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BdnfP21237 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
BdnfP21237 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BdnfP21237 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
BdnfP21237 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BdnfP21237 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BdnfP21237 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BdnfP21237 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
BdnfP21237 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.69■□□□□ 0.74
BdnfP21237 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BdnfP21237 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BdnfP21237 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BdnfP21237 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BdnfP21237 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BdnfP21237 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BdnfP21237 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BdnfP21237 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BdnfP21237 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.68■□□□□ 0.74
BdnfP21237 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.68■□□□□ 0.74
BdnfP21237 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BdnfP21237 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BdnfP21237 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BdnfP21237 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.68■□□□□ 0.74
BdnfP21237 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
BdnfP21237 Iqck-206ENSMUST00000208658 2891 ntBASIC19.68■□□□□ 0.74
BdnfP21237 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BdnfP21237 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BdnfP21237 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BdnfP21237 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
BdnfP21237 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.67■□□□□ 0.74
BdnfP21237 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
BdnfP21237 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BdnfP21237 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BdnfP21237 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BdnfP21237 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BdnfP21237 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BdnfP21237 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BdnfP21237 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BdnfP21237 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BdnfP21237 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BdnfP21237 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
BdnfP21237 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BdnfP21237 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
BdnfP21237 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BdnfP21237 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.66■□□□□ 0.74
BdnfP21237 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
BdnfP21237 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
BdnfP21237 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BdnfP21237 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.66■□□□□ 0.74
BdnfP21237 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BdnfP21237 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BdnfP21237 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
BdnfP21237 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
BdnfP21237 Golph3-202ENSMUST00000226517 2359 ntBASIC19.65■□□□□ 0.74
BdnfP21237 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BdnfP21237 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BdnfP21237 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BdnfP21237 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BdnfP21237 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BdnfP21237 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BdnfP21237 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BdnfP21237 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BdnfP21237 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
BdnfP21237 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BdnfP21237 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BdnfP21237 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.64■□□□□ 0.74
BdnfP21237 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BdnfP21237 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
BdnfP21237 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
BdnfP21237 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BdnfP21237 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BdnfP21237 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BdnfP21237 Cap2-205ENSMUST00000225824 1634 ntBASIC19.64■□□□□ 0.73
BdnfP21237 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BdnfP21237 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BdnfP21237 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BdnfP21237 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
BdnfP21237 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BdnfP21237 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BdnfP21237 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BdnfP21237 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BdnfP21237 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BdnfP21237 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BdnfP21237 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms