Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgn1P18608 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.93■□□□□ 0.62
Hmgn1P18608 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgn1P18608 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgn1P18608 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.93■□□□□ 0.62
Hmgn1P18608 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgn1P18608 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmgn1P18608 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn1P18608 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hmgn1P18608 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn1P18608 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn1P18608 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn1P18608 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hmgn1P18608 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn1P18608 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmgn1P18608 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn1P18608 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn1P18608 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn1P18608 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.91■□□□□ 0.62
Hmgn1P18608 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn1P18608 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn1P18608 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn1P18608 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn1P18608 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn1P18608 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn1P18608 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmgn1P18608 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn1P18608 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.9■□□□□ 0.62
Hmgn1P18608 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn1P18608 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hmgn1P18608 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn1P18608 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn1P18608 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn1P18608 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hmgn1P18608 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmgn1P18608 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hmgn1P18608 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgn1P18608 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgn1P18608 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgn1P18608 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgn1P18608 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmgn1P18608 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn1P18608 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn1P18608 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn1P18608 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hmgn1P18608 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.89■□□□□ 0.61
Hmgn1P18608 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.89■□□□□ 0.61
Hmgn1P18608 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmgn1P18608 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.88■□□□□ 0.61
Hmgn1P18608 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.88■□□□□ 0.61
Hmgn1P18608 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn1P18608 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn1P18608 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Hmgn1P18608 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn1P18608 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn1P18608 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.88■□□□□ 0.61
Hmgn1P18608 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmgn1P18608 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Hmgn1P18608 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn1P18608 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn1P18608 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn1P18608 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.87■□□□□ 0.61
Hmgn1P18608 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Hmgn1P18608 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn1P18608 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hmgn1P18608 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hmgn1P18608 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn1P18608 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hmgn1P18608 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn1P18608 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn1P18608 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hmgn1P18608 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn1P18608 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn1P18608 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn1P18608 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.86■□□□□ 0.61
Hmgn1P18608 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Hmgn1P18608 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn1P18608 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hmgn1P18608 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn1P18608 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.86■□□□□ 0.61
Hmgn1P18608 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn1P18608 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Hmgn1P18608 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn1P18608 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn1P18608 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn1P18608 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.85■□□□□ 0.61
Hmgn1P18608 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn1P18608 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn1P18608 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn1P18608 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn1P18608 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hmgn1P18608 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn1P18608 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn1P18608 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn1P18608 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn1P18608 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.84■□□□□ 0.61
Hmgn1P18608 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn1P18608 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn1P18608 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn1P18608 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms