Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Hoxa9P09631 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Hoxa9P09631 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxa9P09631 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxa9P09631 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxa9P09631 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxa9P09631 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxa9P09631 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxa9P09631 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxa9P09631 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxa9P09631 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.84■□□□□ 0.93
Hoxa9P09631 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxa9P09631 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.84■□□□□ 0.93
Hoxa9P09631 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxa9P09631 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxa9P09631 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxa9P09631 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxa9P09631 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxa9P09631 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.83■□□□□ 0.93
Hoxa9P09631 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Hoxa9P09631 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxa9P09631 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxa9P09631 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxa9P09631 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.83■□□□□ 0.93
Hoxa9P09631 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxa9P09631 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Hoxa9P09631 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.82■□□□□ 0.92
Hoxa9P09631 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxa9P09631 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.82■□□□□ 0.92
Hoxa9P09631 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxa9P09631 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.82■□□□□ 0.92
Hoxa9P09631 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxa9P09631 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxa9P09631 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxa9P09631 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxa9P09631 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.81■□□□□ 0.92
Hoxa9P09631 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxa9P09631 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxa9P09631 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxa9P09631 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxa9P09631 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxa9P09631 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxa9P09631 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxa9P09631 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Hoxa9P09631 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.8■□□□□ 0.92
Hoxa9P09631 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.8■□□□□ 0.92
Hoxa9P09631 Gm7143-201ENSMUST00000222811 859 ntBASIC20.8■□□□□ 0.92
Hoxa9P09631 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hoxa9P09631 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxa9P09631 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxa9P09631 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxa9P09631 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
Hoxa9P09631 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxa9P09631 Gm6139-201ENSMUST00000079261 882 ntBASIC20.79■□□□□ 0.92
Hoxa9P09631 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxa9P09631 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxa9P09631 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.79■□□□□ 0.92
Hoxa9P09631 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.79■□□□□ 0.92
Hoxa9P09631 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxa9P09631 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxa9P09631 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.78■□□□□ 0.92
Hoxa9P09631 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxa9P09631 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxa9P09631 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxa9P09631 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxa9P09631 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Hoxa9P09631 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Hoxa9P09631 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxa9P09631 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxa9P09631 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Hoxa9P09631 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Hoxa9P09631 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxa9P09631 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.76■□□□□ 0.91
Hoxa9P09631 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Hoxa9P09631 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxa9P09631 Gm43137-201ENSMUST00000198052 594 ntBASIC20.76■□□□□ 0.91
Hoxa9P09631 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Hoxa9P09631 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxa9P09631 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxa9P09631 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxa9P09631 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxa9P09631 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxa9P09631 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxa9P09631 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.75■□□□□ 0.91
Hoxa9P09631 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Hoxa9P09631 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.75■□□□□ 0.91
Hoxa9P09631 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.75■□□□□ 0.91
Hoxa9P09631 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxa9P09631 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hoxa9P09631 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.75■□□□□ 0.91
Hoxa9P09631 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hoxa9P09631 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.74■□□□□ 0.91
Hoxa9P09631 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxa9P09631 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.74■□□□□ 0.91
Hoxa9P09631 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa9P09631 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa9P09631 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa9P09631 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa9P09631 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa9P09631 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms