Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.5■□□□□ 0.71
Egr1P08046 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.5■□□□□ 0.71
Egr1P08046 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Egr1P08046 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Egr1P08046 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Egr1P08046 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Egr1P08046 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.49■□□□□ 0.71
Egr1P08046 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Egr1P08046 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Egr1P08046 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Egr1P08046 Smad6-203ENSMUST00000179458 273 ntBASIC19.48■□□□□ 0.71
Egr1P08046 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.48■□□□□ 0.71
Egr1P08046 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Egr1P08046 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Egr1P08046 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Egr1P08046 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.48■□□□□ 0.71
Egr1P08046 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.48■□□□□ 0.71
Egr1P08046 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Egr1P08046 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Egr1P08046 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Egr1P08046 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Egr1P08046 Gm7143-201ENSMUST00000222811 859 ntBASIC19.47■□□□□ 0.71
Egr1P08046 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
Egr1P08046 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Egr1P08046 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
Egr1P08046 Gm22240-201ENSMUST00000175225 82 ntBASIC19.46■□□□□ 0.71
Egr1P08046 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
Egr1P08046 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Egr1P08046 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Egr1P08046 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
Egr1P08046 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Egr1P08046 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Egr1P08046 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Egr1P08046 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Egr1P08046 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Egr1P08046 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Egr1P08046 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Egr1P08046 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Egr1P08046 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Egr1P08046 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Egr1P08046 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Egr1P08046 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Egr1P08046 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Egr1P08046 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Egr1P08046 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.44■□□□□ 0.7
Egr1P08046 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Egr1P08046 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Egr1P08046 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.44■□□□□ 0.7
Egr1P08046 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.43■□□□□ 0.7
Egr1P08046 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Egr1P08046 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.43■□□□□ 0.7
Egr1P08046 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.43■□□□□ 0.7
Egr1P08046 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Egr1P08046 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Egr1P08046 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Egr1P08046 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Egr1P08046 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Egr1P08046 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.42■□□□□ 0.7
Egr1P08046 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Egr1P08046 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Egr1P08046 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Egr1P08046 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Egr1P08046 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Egr1P08046 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.41■□□□□ 0.7
Egr1P08046 Gm12441-201ENSMUST00000121806 588 ntBASIC19.41■□□□□ 0.7
Egr1P08046 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.41■□□□□ 0.7
Egr1P08046 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.41■□□□□ 0.7
Egr1P08046 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.41■□□□□ 0.7
Egr1P08046 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Egr1P08046 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Egr1P08046 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Egr1P08046 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Egr1P08046 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Egr1P08046 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Egr1P08046 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Egr1P08046 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Egr1P08046 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.4■□□□□ 0.7
Egr1P08046 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Egr1P08046 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.4■□□□□ 0.7
Egr1P08046 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Egr1P08046 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Egr1P08046 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Egr1P08046 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.39■□□□□ 0.69
Egr1P08046 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Egr1P08046 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Egr1P08046 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Egr1P08046 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Egr1P08046 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Egr1P08046 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.38■□□□□ 0.69
Egr1P08046 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.38■□□□□ 0.69
Egr1P08046 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Egr1P08046 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.38■□□□□ 0.69
Egr1P08046 Gm27801-201ENSMUST00000184174 223 ntBASIC19.38■□□□□ 0.69
Egr1P08046 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.38■□□□□ 0.69
Egr1P08046 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.38■□□□□ 0.69
Egr1P08046 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.38■□□□□ 0.69
Egr1P08046 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Egr1P08046 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Egr1P08046 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Egr1P08046 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms