Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P06336 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P06336 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.09■□□□□ 0.65
P06336 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P06336 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P06336 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
P06336 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
P06336 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P06336 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P06336 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.08■□□□□ 0.64
P06336 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
P06336 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
P06336 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
P06336 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.08■□□□□ 0.64
P06336 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.08■□□□□ 0.64
P06336 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
P06336 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
P06336 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
P06336 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P06336 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P06336 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.07■□□□□ 0.64
P06336 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P06336 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P06336 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P06336 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P06336 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P06336 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.06■□□□□ 0.64
P06336 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P06336 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P06336 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P06336 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P06336 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.06■□□□□ 0.64
P06336 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P06336 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
P06336 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P06336 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P06336 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
P06336 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P06336 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P06336 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P06336 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.05■□□□□ 0.64
P06336 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P06336 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
P06336 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P06336 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06336 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06336 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06336 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06336 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06336 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06336 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06336 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06336 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.04■□□□□ 0.64
P06336 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06336 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.04■□□□□ 0.64
P06336 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P06336 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.04■□□□□ 0.64
P06336 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
P06336 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P06336 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P06336 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P06336 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P06336 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.02■□□□□ 0.64
P06336 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P06336 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P06336 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
P06336 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P06336 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
P06336 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
P06336 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P06336 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.01■□□□□ 0.63
P06336 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P06336 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
P06336 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.01■□□□□ 0.63
P06336 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
P06336 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P06336 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P06336 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P06336 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
P06336 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19■□□□□ 0.63
P06336 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P06336 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19■□□□□ 0.63
P06336 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P06336 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
P06336 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19■□□□□ 0.63
P06336 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19■□□□□ 0.63
P06336 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
P06336 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19■□□□□ 0.63
P06336 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
P06336 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19■□□□□ 0.63
P06336 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
P06336 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P06336 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19■□□□□ 0.63
P06336 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.99■□□□□ 0.63
P06336 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
P06336 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
P06336 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
P06336 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P06336 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P06336 Gm22238-201ENSMUST00000175222 88 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms