Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PdgfrbP05622 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PdgfrbP05622 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PdgfrbP05622 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PdgfrbP05622 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PdgfrbP05622 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
PdgfrbP05622 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PdgfrbP05622 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PdgfrbP05622 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PdgfrbP05622 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
PdgfrbP05622 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PdgfrbP05622 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PdgfrbP05622 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
PdgfrbP05622 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.87■□□□□ 0.93
PdgfrbP05622 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.87■□□□□ 0.93
PdgfrbP05622 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PdgfrbP05622 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PdgfrbP05622 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PdgfrbP05622 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.86■□□□□ 0.93
PdgfrbP05622 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PdgfrbP05622 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PdgfrbP05622 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PdgfrbP05622 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PdgfrbP05622 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PdgfrbP05622 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PdgfrbP05622 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PdgfrbP05622 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PdgfrbP05622 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PdgfrbP05622 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PdgfrbP05622 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PdgfrbP05622 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.85■□□□□ 0.93
PdgfrbP05622 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PdgfrbP05622 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PdgfrbP05622 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.84■□□□□ 0.93
PdgfrbP05622 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.84■□□□□ 0.93
PdgfrbP05622 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PdgfrbP05622 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PdgfrbP05622 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PdgfrbP05622 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PdgfrbP05622 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.84■□□□□ 0.93
PdgfrbP05622 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PdgfrbP05622 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PdgfrbP05622 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.83■□□□□ 0.93
PdgfrbP05622 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PdgfrbP05622 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.83■□□□□ 0.93
PdgfrbP05622 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PdgfrbP05622 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PdgfrbP05622 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PdgfrbP05622 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PdgfrbP05622 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PdgfrbP05622 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PdgfrbP05622 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PdgfrbP05622 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PdgfrbP05622 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PdgfrbP05622 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PdgfrbP05622 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
PdgfrbP05622 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PdgfrbP05622 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PdgfrbP05622 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PdgfrbP05622 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PdgfrbP05622 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PdgfrbP05622 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PdgfrbP05622 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PdgfrbP05622 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PdgfrbP05622 Gm40881-201ENSMUST00000223397 166 ntBASIC20.81■□□□□ 0.92
PdgfrbP05622 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PdgfrbP05622 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
PdgfrbP05622 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
PdgfrbP05622 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PdgfrbP05622 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PdgfrbP05622 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PdgfrbP05622 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.8■□□□□ 0.92
PdgfrbP05622 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.8■□□□□ 0.92
PdgfrbP05622 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PdgfrbP05622 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.8■□□□□ 0.92
PdgfrbP05622 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PdgfrbP05622 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PdgfrbP05622 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PdgfrbP05622 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PdgfrbP05622 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PdgfrbP05622 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PdgfrbP05622 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PdgfrbP05622 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PdgfrbP05622 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.78■□□□□ 0.92
PdgfrbP05622 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.78■□□□□ 0.92
PdgfrbP05622 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.78■□□□□ 0.92
PdgfrbP05622 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PdgfrbP05622 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms