Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P01788 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01788 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P01788 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P01788 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01788 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01788 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01788 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01788 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.29■□□□□ 0.2
P01788 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
P01788 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01788 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01788 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
P01788 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P01788 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P01788 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01788 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P01788 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01788 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01788 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01788 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01788 Iqck-206ENSMUST00000208658 2891 ntBASIC16.28■□□□□ 0.2
P01788 Gm14523-201ENSMUST00000117260 558 ntBASIC16.28■□□□□ 0.2
P01788 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.28■□□□□ 0.2
P01788 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P01788 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01788 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01788 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01788 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P01788 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01788 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
P01788 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P01788 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
P01788 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
P01788 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
P01788 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01788 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P01788 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.27■□□□□ 0.2
P01788 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.27■□□□□ 0.2
P01788 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P01788 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
P01788 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
P01788 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.26■□□□□ 0.19
P01788 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.26■□□□□ 0.19
P01788 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
P01788 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P01788 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
P01788 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01788 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01788 Golph3-202ENSMUST00000226517 2359 ntBASIC16.25■□□□□ 0.19
P01788 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01788 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.25■□□□□ 0.19
P01788 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P01788 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.25■□□□□ 0.19
P01788 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
P01788 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01788 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01788 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01788 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01788 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P01788 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01788 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01788 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
P01788 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01788 Gm11175-201ENSMUST00000116172 543 ntBASIC16.24■□□□□ 0.19
P01788 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.24■□□□□ 0.19
P01788 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.24■□□□□ 0.19
P01788 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01788 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01788 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P01788 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01788 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P01788 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P01788 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01788 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01788 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01788 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01788 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.23■□□□□ 0.19
P01788 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01788 Gm7332-201ENSMUST00000118351 454 ntBASIC16.23■□□□□ 0.19
P01788 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01788 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
P01788 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01788 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P01788 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P01788 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01788 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01788 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.22■□□□□ 0.19
P01788 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P01788 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms