Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Capns1O88456 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Capns1O88456 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.96■□□□□ 0.63
Capns1O88456 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.96■□□□□ 0.63
Capns1O88456 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Capns1O88456 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Capns1O88456 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.96■□□□□ 0.63
Capns1O88456 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capns1O88456 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capns1O88456 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Capns1O88456 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capns1O88456 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Capns1O88456 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capns1O88456 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capns1O88456 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.95■□□□□ 0.62
Capns1O88456 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Capns1O88456 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capns1O88456 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.95■□□□□ 0.62
Capns1O88456 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capns1O88456 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Capns1O88456 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Capns1O88456 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Capns1O88456 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Capns1O88456 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.94■□□□□ 0.62
Capns1O88456 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.94■□□□□ 0.62
Capns1O88456 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Capns1O88456 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Capns1O88456 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Capns1O88456 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Capns1O88456 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Capns1O88456 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Capns1O88456 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Capns1O88456 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Capns1O88456 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capns1O88456 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capns1O88456 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capns1O88456 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.92■□□□□ 0.62
Capns1O88456 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capns1O88456 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capns1O88456 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capns1O88456 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capns1O88456 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Capns1O88456 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capns1O88456 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Capns1O88456 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.91■□□□□ 0.62
Capns1O88456 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Capns1O88456 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Capns1O88456 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Capns1O88456 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Capns1O88456 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Capns1O88456 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Capns1O88456 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Capns1O88456 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Capns1O88456 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.9■□□□□ 0.62
Capns1O88456 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.9■□□□□ 0.62
Capns1O88456 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Capns1O88456 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Capns1O88456 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Capns1O88456 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Capns1O88456 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Capns1O88456 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Capns1O88456 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Capns1O88456 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Capns1O88456 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Capns1O88456 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Capns1O88456 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Capns1O88456 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capns1O88456 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capns1O88456 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.88■□□□□ 0.61
Capns1O88456 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capns1O88456 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.88■□□□□ 0.61
Capns1O88456 Rps24-207ENSMUST00000224568 714 ntBASIC18.88■□□□□ 0.61
Capns1O88456 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Capns1O88456 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capns1O88456 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capns1O88456 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capns1O88456 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capns1O88456 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Capns1O88456 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Capns1O88456 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Capns1O88456 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Capns1O88456 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Capns1O88456 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Capns1O88456 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Capns1O88456 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Capns1O88456 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.87■□□□□ 0.61
Capns1O88456 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Capns1O88456 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.87■□□□□ 0.61
Capns1O88456 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Capns1O88456 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms