Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cacna1hO88427 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1hO88427 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1hO88427 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1hO88427 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.6■□□□□ 0.89
Cacna1hO88427 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1hO88427 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.6■□□□□ 0.89
Cacna1hO88427 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1hO88427 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1hO88427 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cacna1hO88427 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1hO88427 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1hO88427 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.58■□□□□ 0.89
Cacna1hO88427 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.58■□□□□ 0.89
Cacna1hO88427 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.58■□□□□ 0.88
Cacna1hO88427 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cacna1hO88427 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.58■□□□□ 0.88
Cacna1hO88427 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.57■□□□□ 0.88
Cacna1hO88427 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.57■□□□□ 0.88
Cacna1hO88427 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1hO88427 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1hO88427 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1hO88427 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1hO88427 Gm4968-201ENSMUST00000071458 858 ntBASIC20.57■□□□□ 0.88
Cacna1hO88427 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.57■□□□□ 0.88
Cacna1hO88427 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1hO88427 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1hO88427 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cacna1hO88427 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.56■□□□□ 0.88
Cacna1hO88427 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1hO88427 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1hO88427 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1hO88427 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1hO88427 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Cacna1hO88427 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cacna1hO88427 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1hO88427 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cacna1hO88427 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1hO88427 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Cacna1hO88427 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.54■□□□□ 0.88
Cacna1hO88427 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.54■□□□□ 0.88
Cacna1hO88427 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
Cacna1hO88427 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1hO88427 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1hO88427 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1hO88427 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.53■□□□□ 0.88
Cacna1hO88427 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cacna1hO88427 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1hO88427 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1hO88427 Gm20760-201ENSMUST00000179197 648 ntBASIC20.53■□□□□ 0.88
Cacna1hO88427 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1hO88427 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacna1hO88427 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.53■□□□□ 0.88
Cacna1hO88427 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.52■□□□□ 0.88
Cacna1hO88427 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.52■□□□□ 0.88
Cacna1hO88427 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacna1hO88427 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cacna1hO88427 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.51■□□□□ 0.87
Cacna1hO88427 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1hO88427 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1hO88427 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1hO88427 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1hO88427 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1hO88427 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1hO88427 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cacna1hO88427 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1hO88427 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.5■□□□□ 0.87
Cacna1hO88427 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1hO88427 Gm8520-201ENSMUST00000186517 868 ntBASIC20.5■□□□□ 0.87
Cacna1hO88427 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1hO88427 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.49■□□□□ 0.87
Cacna1hO88427 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1hO88427 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Cacna1hO88427 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1hO88427 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cacna1hO88427 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1hO88427 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cacna1hO88427 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.48■□□□□ 0.87
Cacna1hO88427 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1hO88427 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.48■□□□□ 0.87
Cacna1hO88427 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.47■□□□□ 0.87
Cacna1hO88427 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1hO88427 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1hO88427 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1hO88427 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.47■□□□□ 0.87
Cacna1hO88427 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.46■□□□□ 0.87
Cacna1hO88427 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cacna1hO88427 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cacna1hO88427 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1hO88427 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1hO88427 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.46■□□□□ 0.87
Cacna1hO88427 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.45■□□□□ 0.86
Cacna1hO88427 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1hO88427 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1hO88427 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1hO88427 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.44■□□□□ 0.86
Cacna1hO88427 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.44■□□□□ 0.86
Cacna1hO88427 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1hO88427 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1hO88427 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms