Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10139O88245 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10139O88245 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Gm10139O88245 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10139O88245 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10139O88245 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10139O88245 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm10139O88245 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm10139O88245 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10139O88245 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10139O88245 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10139O88245 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10139O88245 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10139O88245 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm10139O88245 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10139O88245 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC12.62□□□□□ -0.39
Gm10139O88245 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10139O88245 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10139O88245 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm10139O88245 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10139O88245 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10139O88245 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.62□□□□□ -0.39
Gm10139O88245 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10139O88245 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm10139O88245 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10139O88245 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gm10139O88245 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Gm10139O88245 AC122428.2-201ENSMUST00000216321 1832 ntBASIC12.61□□□□□ -0.39
Gm10139O88245 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Gm10139O88245 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm10139O88245 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10139O88245 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Gm10139O88245 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gm10139O88245 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC12.6□□□□□ -0.39
Gm10139O88245 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Gm10139O88245 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Gm10139O88245 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Gm10139O88245 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Gm10139O88245 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10139O88245 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm10139O88245 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10139O88245 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10139O88245 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Gm10139O88245 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Gm10139O88245 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC12.59□□□□□ -0.39
Gm10139O88245 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm10139O88245 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.59□□□□□ -0.39
Gm10139O88245 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Gm10139O88245 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10139O88245 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10139O88245 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10139O88245 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10139O88245 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Gm10139O88245 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Gm10139O88245 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Gm10139O88245 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm10139O88245 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm10139O88245 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm10139O88245 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm10139O88245 AC152827.1-201ENSMUST00000221143 2189 ntBASIC12.58□□□□□ -0.4
Gm10139O88245 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm10139O88245 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Gm10139O88245 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm10139O88245 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm10139O88245 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm10139O88245 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm10139O88245 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm10139O88245 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm10139O88245 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm10139O88245 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm10139O88245 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm10139O88245 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm10139O88245 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.57□□□□□ -0.4
Gm10139O88245 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.57□□□□□ -0.4
Gm10139O88245 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm10139O88245 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm10139O88245 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm10139O88245 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm10139O88245 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms