Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pknox1O70477 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pknox1O70477 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pknox1O70477 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pknox1O70477 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pknox1O70477 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pknox1O70477 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.48■□□□□ 0.87
Pknox1O70477 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pknox1O70477 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.48■□□□□ 0.87
Pknox1O70477 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pknox1O70477 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pknox1O70477 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pknox1O70477 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pknox1O70477 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pknox1O70477 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.48■□□□□ 0.87
Pknox1O70477 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pknox1O70477 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pknox1O70477 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pknox1O70477 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pknox1O70477 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.47■□□□□ 0.87
Pknox1O70477 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pknox1O70477 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pknox1O70477 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pknox1O70477 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pknox1O70477 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pknox1O70477 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pknox1O70477 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pknox1O70477 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pknox1O70477 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pknox1O70477 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pknox1O70477 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pknox1O70477 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pknox1O70477 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pknox1O70477 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pknox1O70477 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pknox1O70477 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pknox1O70477 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pknox1O70477 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pknox1O70477 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
Pknox1O70477 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pknox1O70477 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pknox1O70477 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.45■□□□□ 0.86
Pknox1O70477 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pknox1O70477 Cap2-205ENSMUST00000225824 1634 ntBASIC20.45■□□□□ 0.86
Pknox1O70477 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pknox1O70477 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pknox1O70477 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pknox1O70477 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pknox1O70477 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pknox1O70477 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pknox1O70477 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pknox1O70477 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.44■□□□□ 0.86
Pknox1O70477 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pknox1O70477 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.44■□□□□ 0.86
Pknox1O70477 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pknox1O70477 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pknox1O70477 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pknox1O70477 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pknox1O70477 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pknox1O70477 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
Pknox1O70477 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pknox1O70477 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Pknox1O70477 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pknox1O70477 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.43■□□□□ 0.86
Pknox1O70477 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pknox1O70477 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.43■□□□□ 0.86
Pknox1O70477 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pknox1O70477 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pknox1O70477 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.42■□□□□ 0.86
Pknox1O70477 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pknox1O70477 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.42■□□□□ 0.86
Pknox1O70477 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.42■□□□□ 0.86
Pknox1O70477 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pknox1O70477 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pknox1O70477 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pknox1O70477 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pknox1O70477 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pknox1O70477 Gm45444-201ENSMUST00000211394 898 ntBASIC20.41■□□□□ 0.86
Pknox1O70477 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pknox1O70477 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pknox1O70477 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pknox1O70477 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pknox1O70477 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pknox1O70477 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pknox1O70477 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pknox1O70477 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Pknox1O70477 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pknox1O70477 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pknox1O70477 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Pknox1O70477 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pknox1O70477 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pknox1O70477 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.39■□□□□ 0.85
Pknox1O70477 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pknox1O70477 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.39■□□□□ 0.85
Pknox1O70477 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.39■□□□□ 0.85
Pknox1O70477 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pknox1O70477 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pknox1O70477 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pknox1O70477 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pknox1O70477 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms