Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim1O70400 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
Pdlim1O70400 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim1O70400 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim1O70400 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim1O70400 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim1O70400 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim1O70400 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.45■□□□□ 0.86
Pdlim1O70400 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pdlim1O70400 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim1O70400 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim1O70400 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim1O70400 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim1O70400 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim1O70400 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim1O70400 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim1O70400 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim1O70400 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Pdlim1O70400 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim1O70400 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
Pdlim1O70400 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim1O70400 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pdlim1O70400 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim1O70400 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim1O70400 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim1O70400 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pdlim1O70400 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.43■□□□□ 0.86
Pdlim1O70400 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.43■□□□□ 0.86
Pdlim1O70400 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim1O70400 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim1O70400 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim1O70400 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pdlim1O70400 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pdlim1O70400 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim1O70400 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim1O70400 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim1O70400 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim1O70400 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim1O70400 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim1O70400 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim1O70400 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim1O70400 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.41■□□□□ 0.86
Pdlim1O70400 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Pdlim1O70400 Gm7143-201ENSMUST00000222811 859 ntBASIC20.41■□□□□ 0.86
Pdlim1O70400 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim1O70400 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim1O70400 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim1O70400 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim1O70400 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim1O70400 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim1O70400 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim1O70400 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim1O70400 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim1O70400 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pdlim1O70400 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim1O70400 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pdlim1O70400 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pdlim1O70400 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim1O70400 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim1O70400 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim1O70400 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.39■□□□□ 0.86
Pdlim1O70400 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim1O70400 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.39■□□□□ 0.85
Pdlim1O70400 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.39■□□□□ 0.85
Pdlim1O70400 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.39■□□□□ 0.85
Pdlim1O70400 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pdlim1O70400 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Pdlim1O70400 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim1O70400 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Pdlim1O70400 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim1O70400 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.38■□□□□ 0.85
Pdlim1O70400 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pdlim1O70400 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim1O70400 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Pdlim1O70400 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim1O70400 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim1O70400 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim1O70400 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim1O70400 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim1O70400 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pdlim1O70400 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim1O70400 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pdlim1O70400 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim1O70400 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.36■□□□□ 0.85
Pdlim1O70400 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Pdlim1O70400 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
Pdlim1O70400 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.36■□□□□ 0.85
Pdlim1O70400 Gm9870-201ENSMUST00000063874 645 ntBASIC20.36■□□□□ 0.85
Pdlim1O70400 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim1O70400 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.36■□□□□ 0.85
Pdlim1O70400 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim1O70400 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim1O70400 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Pdlim1O70400 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pdlim1O70400 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim1O70400 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim1O70400 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim1O70400 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim1O70400 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pdlim1O70400 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms