Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC27.65■■■□□ 2.02
Cntnap1O54991 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Cntnap1O54991 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC27.65■■■□□ 2.02
Cntnap1O54991 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Cntnap1O54991 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Cntnap1O54991 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC27.64■■■□□ 2.02
Cntnap1O54991 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Cntnap1O54991 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Cntnap1O54991 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC27.64■■■□□ 2.02
Cntnap1O54991 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
Cntnap1O54991 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Cntnap1O54991 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Cntnap1O54991 Gm10209-201ENSMUST00000203397 1607 ntBASIC27.64■■■□□ 2.02
Cntnap1O54991 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Cntnap1O54991 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Cntnap1O54991 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Cntnap1O54991 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC27.63■■■□□ 2.01
Cntnap1O54991 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC27.63■■■□□ 2.01
Cntnap1O54991 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Cntnap1O54991 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Cntnap1O54991 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC27.62■■■□□ 2.01
Cntnap1O54991 Gm20760-201ENSMUST00000179197 648 ntBASIC27.62■■■□□ 2.01
Cntnap1O54991 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC27.61■■■□□ 2.01
Cntnap1O54991 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cntnap1O54991 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC27.61■■■□□ 2.01
Cntnap1O54991 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cntnap1O54991 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Cntnap1O54991 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC27.6■■■□□ 2.01
Cntnap1O54991 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
Cntnap1O54991 AC135963.1-201ENSMUST00000211640 717 ntBASIC27.6■■■□□ 2.01
Cntnap1O54991 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Cntnap1O54991 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Cntnap1O54991 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
Cntnap1O54991 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC27.59■■■□□ 2.01
Cntnap1O54991 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
Cntnap1O54991 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Cntnap1O54991 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cntnap1O54991 AC166356.1-201ENSMUST00000228236 1426 ntBASIC27.58■■■□□ 2.01
Cntnap1O54991 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC27.58■■■□□ 2.01
Cntnap1O54991 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cntnap1O54991 Kdm3b-204ENSMUST00000224715 2032 ntBASIC27.57■■■□□ 2
Cntnap1O54991 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC27.57■■■□□ 2
Cntnap1O54991 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cntnap1O54991 Gm4430-201ENSMUST00000192413 1943 ntBASIC27.57■■■□□ 2
Cntnap1O54991 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
Cntnap1O54991 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC27.57■■■□□ 2
Cntnap1O54991 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC27.57■■■□□ 2
Cntnap1O54991 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cntnap1O54991 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Cntnap1O54991 AC165080.2-201ENSMUST00000217491 1530 ntBASIC27.56■■■□□ 2
Cntnap1O54991 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC27.56■■■□□ 2
Cntnap1O54991 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
Cntnap1O54991 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
Cntnap1O54991 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Cntnap1O54991 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC27.54■■■□□ 2
Cntnap1O54991 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC27.54■■■□□ 2
Cntnap1O54991 AC130671.1-201ENSMUST00000227384 1237 ntBASIC27.54■■■□□ 2
Cntnap1O54991 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Cntnap1O54991 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Cntnap1O54991 Gm12527-201ENSMUST00000117967 564 ntBASIC27.53■■■□□ 2
Cntnap1O54991 Gm8520-201ENSMUST00000186517 868 ntBASIC27.53■■■□□ 2
Cntnap1O54991 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC27.53■■■□□ 2
Cntnap1O54991 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
Cntnap1O54991 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC27.53■■■□□ 2
Cntnap1O54991 Gm4968-201ENSMUST00000071458 858 ntBASIC27.53■■■□□ 2
Cntnap1O54991 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC27.53■■■□□ 2
Cntnap1O54991 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Cntnap1O54991 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Cntnap1O54991 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC27.53■■■□□ 2
Cntnap1O54991 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC27.52■■■□□ 2
Cntnap1O54991 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Cntnap1O54991 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC27.52■■■□□ 2
Cntnap1O54991 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC27.52■■■□□ 2
Cntnap1O54991 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Cntnap1O54991 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC27.51■■□□□ 1.99
Cntnap1O54991 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC27.51■■□□□ 1.99
Cntnap1O54991 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Cntnap1O54991 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Cntnap1O54991 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Cntnap1O54991 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC27.51■■□□□ 1.99
Cntnap1O54991 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Cntnap1O54991 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Cntnap1O54991 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Cntnap1O54991 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cntnap1O54991 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cntnap1O54991 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cntnap1O54991 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC27.48■■□□□ 1.99
Cntnap1O54991 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cntnap1O54991 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cntnap1O54991 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Cntnap1O54991 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC27.48■■□□□ 1.99
Cntnap1O54991 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Cntnap1O54991 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Cntnap1O54991 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
Cntnap1O54991 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC27.47■■□□□ 1.99
Cntnap1O54991 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cntnap1O54991 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cntnap1O54991 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC27.47■■□□□ 1.99
Cntnap1O54991 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cntnap1O54991 Gm43530-201ENSMUST00000195920 274 ntBASIC27.47■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms