Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DffbO54788 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DffbO54788 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DffbO54788 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DffbO54788 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DffbO54788 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DffbO54788 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.64■□□□□ 0.41
DffbO54788 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.63■□□□□ 0.41
DffbO54788 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
DffbO54788 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DffbO54788 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.63■□□□□ 0.41
DffbO54788 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DffbO54788 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DffbO54788 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DffbO54788 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DffbO54788 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DffbO54788 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.63■□□□□ 0.41
DffbO54788 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DffbO54788 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DffbO54788 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DffbO54788 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
DffbO54788 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.62■□□□□ 0.41
DffbO54788 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
DffbO54788 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.62■□□□□ 0.41
DffbO54788 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.62■□□□□ 0.41
DffbO54788 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DffbO54788 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DffbO54788 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DffbO54788 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DffbO54788 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.61■□□□□ 0.41
DffbO54788 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
DffbO54788 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DffbO54788 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DffbO54788 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DffbO54788 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DffbO54788 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DffbO54788 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DffbO54788 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DffbO54788 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DffbO54788 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DffbO54788 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.6■□□□□ 0.41
DffbO54788 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DffbO54788 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
DffbO54788 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DffbO54788 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DffbO54788 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DffbO54788 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DffbO54788 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DffbO54788 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DffbO54788 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
DffbO54788 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.59■□□□□ 0.41
DffbO54788 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DffbO54788 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DffbO54788 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
DffbO54788 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DffbO54788 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DffbO54788 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DffbO54788 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DffbO54788 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DffbO54788 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
DffbO54788 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DffbO54788 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DffbO54788 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DffbO54788 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
DffbO54788 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
DffbO54788 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DffbO54788 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DffbO54788 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.57■□□□□ 0.4
DffbO54788 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.57■□□□□ 0.4
DffbO54788 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.57■□□□□ 0.4
DffbO54788 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DffbO54788 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DffbO54788 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
DffbO54788 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
DffbO54788 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DffbO54788 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DffbO54788 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DffbO54788 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DffbO54788 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DffbO54788 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DffbO54788 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DffbO54788 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DffbO54788 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DffbO54788 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DffbO54788 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DffbO54788 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DffbO54788 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DffbO54788 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DffbO54788 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DffbO54788 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms