Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm2O35900 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm2O35900 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm2O35900 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm2O35900 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.46■□□□□ 0.55
Lsm2O35900 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm2O35900 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lsm2O35900 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm2O35900 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm2O35900 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm2O35900 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm2O35900 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm2O35900 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm2O35900 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm2O35900 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.45■□□□□ 0.54
Lsm2O35900 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.45■□□□□ 0.54
Lsm2O35900 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm2O35900 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm2O35900 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.45■□□□□ 0.54
Lsm2O35900 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm2O35900 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm2O35900 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm2O35900 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm2O35900 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm2O35900 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm2O35900 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm2O35900 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.44■□□□□ 0.54
Lsm2O35900 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm2O35900 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm2O35900 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm2O35900 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm2O35900 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Lsm2O35900 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm2O35900 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm2O35900 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm2O35900 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.43■□□□□ 0.54
Lsm2O35900 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm2O35900 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Lsm2O35900 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm2O35900 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm2O35900 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.43■□□□□ 0.54
Lsm2O35900 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm2O35900 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm2O35900 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm2O35900 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm2O35900 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm2O35900 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm2O35900 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm2O35900 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Lsm2O35900 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm2O35900 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm2O35900 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Lsm2O35900 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm2O35900 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm2O35900 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm2O35900 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm2O35900 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm2O35900 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm2O35900 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm2O35900 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.4■□□□□ 0.54
Lsm2O35900 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm2O35900 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lsm2O35900 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm2O35900 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm2O35900 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm2O35900 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Lsm2O35900 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.39■□□□□ 0.53
Lsm2O35900 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.39■□□□□ 0.53
Lsm2O35900 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Lsm2O35900 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm2O35900 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Lsm2O35900 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Lsm2O35900 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm2O35900 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm2O35900 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm2O35900 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm2O35900 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lsm2O35900 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm2O35900 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lsm2O35900 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms