Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sptlc1O35704 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sptlc1O35704 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Sptlc1O35704 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Sptlc1O35704 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Sptlc1O35704 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.66■■□□□ 1.22
Sptlc1O35704 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sptlc1O35704 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sptlc1O35704 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sptlc1O35704 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sptlc1O35704 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.65■■□□□ 1.22
Sptlc1O35704 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Sptlc1O35704 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Sptlc1O35704 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sptlc1O35704 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.64■■□□□ 1.21
Sptlc1O35704 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Sptlc1O35704 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sptlc1O35704 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sptlc1O35704 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Sptlc1O35704 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sptlc1O35704 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sptlc1O35704 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sptlc1O35704 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sptlc1O35704 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Sptlc1O35704 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sptlc1O35704 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.63■■□□□ 1.21
Sptlc1O35704 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Sptlc1O35704 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sptlc1O35704 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sptlc1O35704 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sptlc1O35704 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
Sptlc1O35704 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Sptlc1O35704 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sptlc1O35704 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sptlc1O35704 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sptlc1O35704 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sptlc1O35704 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sptlc1O35704 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sptlc1O35704 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sptlc1O35704 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sptlc1O35704 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sptlc1O35704 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Sptlc1O35704 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sptlc1O35704 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.6■■□□□ 1.21
Sptlc1O35704 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sptlc1O35704 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Sptlc1O35704 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.6■■□□□ 1.21
Sptlc1O35704 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sptlc1O35704 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sptlc1O35704 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.6■■□□□ 1.21
Sptlc1O35704 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sptlc1O35704 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sptlc1O35704 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sptlc1O35704 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sptlc1O35704 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.59■■□□□ 1.21
Sptlc1O35704 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
Sptlc1O35704 Gm43017-201ENSMUST00000198296 752 ntBASIC22.59■■□□□ 1.21
Sptlc1O35704 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sptlc1O35704 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sptlc1O35704 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sptlc1O35704 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sptlc1O35704 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sptlc1O35704 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sptlc1O35704 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sptlc1O35704 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.59■■□□□ 1.21
Sptlc1O35704 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Sptlc1O35704 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sptlc1O35704 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sptlc1O35704 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sptlc1O35704 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Sptlc1O35704 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sptlc1O35704 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
Sptlc1O35704 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.58■■□□□ 1.21
Sptlc1O35704 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.58■■□□□ 1.21
Sptlc1O35704 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.58■■□□□ 1.21
Sptlc1O35704 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sptlc1O35704 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sptlc1O35704 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
Sptlc1O35704 Gm8493-201ENSMUST00000196881 489 ntBASIC22.57■■□□□ 1.2
Sptlc1O35704 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Sptlc1O35704 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sptlc1O35704 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.56■■□□□ 1.2
Sptlc1O35704 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sptlc1O35704 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sptlc1O35704 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sptlc1O35704 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.56■■□□□ 1.2
Sptlc1O35704 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.56■■□□□ 1.2
Sptlc1O35704 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sptlc1O35704 Gm5576-201ENSMUST00000075809 1236 ntBASIC22.56■■□□□ 1.2
Sptlc1O35704 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sptlc1O35704 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sptlc1O35704 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sptlc1O35704 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.56■■□□□ 1.2
Sptlc1O35704 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sptlc1O35704 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Sptlc1O35704 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sptlc1O35704 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.55■■□□□ 1.2
Sptlc1O35704 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sptlc1O35704 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Sptlc1O35704 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms