Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clk4O35493 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk4O35493 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clk4O35493 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clk4O35493 Gm45102-201ENSMUST00000207427 857 ntBASIC19.75■□□□□ 0.75
Clk4O35493 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk4O35493 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.75■□□□□ 0.75
Clk4O35493 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk4O35493 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk4O35493 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clk4O35493 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clk4O35493 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.74■□□□□ 0.75
Clk4O35493 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.74■□□□□ 0.75
Clk4O35493 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clk4O35493 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clk4O35493 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clk4O35493 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.74■□□□□ 0.75
Clk4O35493 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.73■□□□□ 0.75
Clk4O35493 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clk4O35493 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Clk4O35493 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.73■□□□□ 0.75
Clk4O35493 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clk4O35493 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk4O35493 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk4O35493 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk4O35493 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Clk4O35493 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.72■□□□□ 0.75
Clk4O35493 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.72■□□□□ 0.75
Clk4O35493 Rps24-207ENSMUST00000224568 714 ntBASIC19.72■□□□□ 0.75
Clk4O35493 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk4O35493 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk4O35493 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk4O35493 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clk4O35493 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Clk4O35493 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.71■□□□□ 0.75
Clk4O35493 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk4O35493 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Clk4O35493 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Clk4O35493 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Clk4O35493 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk4O35493 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clk4O35493 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clk4O35493 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk4O35493 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Clk4O35493 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clk4O35493 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk4O35493 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk4O35493 Gm7417-201ENSMUST00000192950 473 ntBASIC19.7■□□□□ 0.74
Clk4O35493 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.7■□□□□ 0.74
Clk4O35493 Gm9959-201ENSMUST00000068277 390 ntBASIC19.7■□□□□ 0.74
Clk4O35493 Iqck-206ENSMUST00000208658 2891 ntBASIC19.7■□□□□ 0.74
Clk4O35493 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk4O35493 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clk4O35493 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Clk4O35493 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk4O35493 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk4O35493 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk4O35493 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Clk4O35493 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.69■□□□□ 0.74
Clk4O35493 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.69■□□□□ 0.74
Clk4O35493 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk4O35493 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk4O35493 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk4O35493 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk4O35493 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk4O35493 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk4O35493 Etf1-202ENSMUST00000180351 108 ntBASIC19.68■□□□□ 0.74
Clk4O35493 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.68■□□□□ 0.74
Clk4O35493 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk4O35493 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk4O35493 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk4O35493 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk4O35493 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clk4O35493 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.67■□□□□ 0.74
Clk4O35493 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk4O35493 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk4O35493 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clk4O35493 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk4O35493 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clk4O35493 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk4O35493 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Clk4O35493 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk4O35493 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk4O35493 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk4O35493 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.65■□□□□ 0.74
Clk4O35493 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clk4O35493 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.65■□□□□ 0.74
Clk4O35493 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk4O35493 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk4O35493 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk4O35493 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clk4O35493 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk4O35493 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clk4O35493 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clk4O35493 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk4O35493 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk4O35493 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.64■□□□□ 0.74
Clk4O35493 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.64■□□□□ 0.73
Clk4O35493 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.64■□□□□ 0.73
Clk4O35493 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 1047.8 ms