Protein–RNA interactions for Protein: O35457

Ccrl2, C-C chemokine receptor-like 2, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccrl2O35457 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccrl2O35457 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccrl2O35457 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ccrl2O35457 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccrl2O35457 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccrl2O35457 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccrl2O35457 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccrl2O35457 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccrl2O35457 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ccrl2O35457 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccrl2O35457 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.33■□□□□ 0.68
Ccrl2O35457 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccrl2O35457 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccrl2O35457 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccrl2O35457 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccrl2O35457 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccrl2O35457 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccrl2O35457 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccrl2O35457 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccrl2O35457 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccrl2O35457 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccrl2O35457 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccrl2O35457 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccrl2O35457 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
Ccrl2O35457 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccrl2O35457 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccrl2O35457 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccrl2O35457 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccrl2O35457 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccrl2O35457 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccrl2O35457 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccrl2O35457 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccrl2O35457 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccrl2O35457 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccrl2O35457 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccrl2O35457 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccrl2O35457 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccrl2O35457 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccrl2O35457 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccrl2O35457 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccrl2O35457 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.31■□□□□ 0.68
Ccrl2O35457 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.31■□□□□ 0.68
Ccrl2O35457 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccrl2O35457 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccrl2O35457 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccrl2O35457 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.3■□□□□ 0.68
Ccrl2O35457 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.3■□□□□ 0.68
Ccrl2O35457 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccrl2O35457 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccrl2O35457 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccrl2O35457 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccrl2O35457 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccrl2O35457 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccrl2O35457 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccrl2O35457 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccrl2O35457 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccrl2O35457 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccrl2O35457 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccrl2O35457 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Ccrl2O35457 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccrl2O35457 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccrl2O35457 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccrl2O35457 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccrl2O35457 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccrl2O35457 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.28■□□□□ 0.68
Ccrl2O35457 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.28■□□□□ 0.68
Ccrl2O35457 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccrl2O35457 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccrl2O35457 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccrl2O35457 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccrl2O35457 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Ccrl2O35457 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccrl2O35457 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccrl2O35457 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccrl2O35457 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccrl2O35457 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccrl2O35457 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccrl2O35457 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccrl2O35457 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.26■□□□□ 0.67
Ccrl2O35457 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccrl2O35457 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccrl2O35457 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccrl2O35457 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccrl2O35457 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccrl2O35457 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccrl2O35457 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccrl2O35457 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccrl2O35457 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccrl2O35457 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccrl2O35457 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms