Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2b3O09039 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
Sh2b3O09039 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2b3O09039 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2b3O09039 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2b3O09039 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2b3O09039 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2b3O09039 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2b3O09039 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2b3O09039 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2b3O09039 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2b3O09039 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.34■□□□□ 0.53
Sh2b3O09039 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Sh2b3O09039 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2b3O09039 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2b3O09039 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2b3O09039 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sh2b3O09039 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2b3O09039 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2b3O09039 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2b3O09039 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2b3O09039 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sh2b3O09039 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2b3O09039 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2b3O09039 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2b3O09039 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2b3O09039 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2b3O09039 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.31■□□□□ 0.52
Sh2b3O09039 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2b3O09039 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh2b3O09039 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2b3O09039 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2b3O09039 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sh2b3O09039 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2b3O09039 Gm12922-201ENSMUST00000120626 809 ntBASIC18.3■□□□□ 0.52
Sh2b3O09039 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2b3O09039 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2b3O09039 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2b3O09039 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2b3O09039 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh2b3O09039 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2b3O09039 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.29■□□□□ 0.52
Sh2b3O09039 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sh2b3O09039 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sh2b3O09039 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sh2b3O09039 Gm21956-201ENSMUST00000179946 522 ntBASIC18.29■□□□□ 0.52
Sh2b3O09039 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sh2b3O09039 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh2b3O09039 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.29■□□□□ 0.52
Sh2b3O09039 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2b3O09039 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2b3O09039 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2b3O09039 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2b3O09039 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2b3O09039 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2b3O09039 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.28■□□□□ 0.52
Sh2b3O09039 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Sh2b3O09039 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2b3O09039 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh2b3O09039 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2b3O09039 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2b3O09039 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sh2b3O09039 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Sh2b3O09039 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.27■□□□□ 0.52
Sh2b3O09039 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh2b3O09039 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sh2b3O09039 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.27■□□□□ 0.52
Sh2b3O09039 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.27■□□□□ 0.52
Sh2b3O09039 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.27■□□□□ 0.52
Sh2b3O09039 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.27■□□□□ 0.52
Sh2b3O09039 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh2b3O09039 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Sh2b3O09039 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2b3O09039 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.26■□□□□ 0.51
Sh2b3O09039 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2b3O09039 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2b3O09039 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Sh2b3O09039 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.26■□□□□ 0.51
Sh2b3O09039 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2b3O09039 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2b3O09039 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2b3O09039 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2b3O09039 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh2b3O09039 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2b3O09039 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2b3O09039 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.25■□□□□ 0.51
Sh2b3O09039 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2b3O09039 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.25■□□□□ 0.51
Sh2b3O09039 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Sh2b3O09039 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sh2b3O09039 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sh2b3O09039 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.25■□□□□ 0.51
Sh2b3O09039 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh2b3O09039 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2b3O09039 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2b3O09039 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Sh2b3O09039 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.24■□□□□ 0.51
Sh2b3O09039 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2b3O09039 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh2b3O09039 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms