Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.02■□□□□ 0.96
Trove2O08848 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trove2O08848 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trove2O08848 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trove2O08848 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trove2O08848 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.01■□□□□ 0.95
Trove2O08848 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trove2O08848 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.01■□□□□ 0.95
Trove2O08848 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.01■□□□□ 0.95
Trove2O08848 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trove2O08848 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trove2O08848 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trove2O08848 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trove2O08848 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trove2O08848 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trove2O08848 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trove2O08848 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21■□□□□ 0.95
Trove2O08848 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trove2O08848 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trove2O08848 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trove2O08848 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trove2O08848 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trove2O08848 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trove2O08848 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trove2O08848 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trove2O08848 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trove2O08848 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.99■□□□□ 0.95
Trove2O08848 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trove2O08848 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trove2O08848 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trove2O08848 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trove2O08848 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.98■□□□□ 0.95
Trove2O08848 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trove2O08848 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.98■□□□□ 0.95
Trove2O08848 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trove2O08848 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trove2O08848 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trove2O08848 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trove2O08848 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trove2O08848 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trove2O08848 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trove2O08848 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trove2O08848 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trove2O08848 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trove2O08848 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trove2O08848 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trove2O08848 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trove2O08848 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trove2O08848 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trove2O08848 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trove2O08848 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trove2O08848 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trove2O08848 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Trove2O08848 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trove2O08848 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trove2O08848 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.96■□□□□ 0.95
Trove2O08848 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trove2O08848 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trove2O08848 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trove2O08848 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trove2O08848 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trove2O08848 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trove2O08848 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trove2O08848 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trove2O08848 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trove2O08848 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trove2O08848 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.94■□□□□ 0.94
Trove2O08848 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trove2O08848 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trove2O08848 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trove2O08848 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trove2O08848 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trove2O08848 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trove2O08848 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.93■□□□□ 0.94
Trove2O08848 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trove2O08848 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trove2O08848 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trove2O08848 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Trove2O08848 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trove2O08848 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Trove2O08848 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.92■□□□□ 0.94
Trove2O08848 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trove2O08848 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trove2O08848 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trove2O08848 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms