Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr2jO08740 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Polr2jO08740 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.79■□□□□ 0.76
Polr2jO08740 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Polr2jO08740 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.79■□□□□ 0.76
Polr2jO08740 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Polr2jO08740 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr2jO08740 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Polr2jO08740 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Polr2jO08740 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Polr2jO08740 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Polr2jO08740 Gm11175-201ENSMUST00000116172 543 ntBASIC19.77■□□□□ 0.76
Polr2jO08740 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr2jO08740 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr2jO08740 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Polr2jO08740 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr2jO08740 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Polr2jO08740 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr2jO08740 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Polr2jO08740 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr2jO08740 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Polr2jO08740 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Polr2jO08740 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr2jO08740 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.76■□□□□ 0.75
Polr2jO08740 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Polr2jO08740 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Polr2jO08740 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Polr2jO08740 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr2jO08740 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr2jO08740 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr2jO08740 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Polr2jO08740 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Polr2jO08740 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr2jO08740 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Polr2jO08740 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Polr2jO08740 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr2jO08740 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.74■□□□□ 0.75
Polr2jO08740 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.74■□□□□ 0.75
Polr2jO08740 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr2jO08740 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Polr2jO08740 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr2jO08740 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Polr2jO08740 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr2jO08740 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Polr2jO08740 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Polr2jO08740 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr2jO08740 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr2jO08740 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.73■□□□□ 0.75
Polr2jO08740 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Polr2jO08740 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Polr2jO08740 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr2jO08740 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr2jO08740 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr2jO08740 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Polr2jO08740 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Polr2jO08740 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Polr2jO08740 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Polr2jO08740 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Polr2jO08740 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr2jO08740 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr2jO08740 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Polr2jO08740 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr2jO08740 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Polr2jO08740 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Polr2jO08740 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr2jO08740 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Polr2jO08740 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr2jO08740 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr2jO08740 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Polr2jO08740 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.7■□□□□ 0.74
Polr2jO08740 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Polr2jO08740 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr2jO08740 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Polr2jO08740 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms