Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.96■□□□□ 0.95
AlyrefO08583 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.96■□□□□ 0.95
AlyrefO08583 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AlyrefO08583 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AlyrefO08583 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AlyrefO08583 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
AlyrefO08583 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
AlyrefO08583 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AlyrefO08583 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AlyrefO08583 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AlyrefO08583 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AlyrefO08583 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AlyrefO08583 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AlyrefO08583 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AlyrefO08583 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AlyrefO08583 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AlyrefO08583 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.93■□□□□ 0.94
AlyrefO08583 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AlyrefO08583 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AlyrefO08583 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AlyrefO08583 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
AlyrefO08583 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
AlyrefO08583 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
AlyrefO08583 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.92■□□□□ 0.94
AlyrefO08583 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
AlyrefO08583 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
AlyrefO08583 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
AlyrefO08583 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AlyrefO08583 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AlyrefO08583 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
AlyrefO08583 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
AlyrefO08583 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.91■□□□□ 0.94
AlyrefO08583 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.91■□□□□ 0.94
AlyrefO08583 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AlyrefO08583 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.91■□□□□ 0.94
AlyrefO08583 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.91■□□□□ 0.94
AlyrefO08583 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AlyrefO08583 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AlyrefO08583 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AlyrefO08583 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AlyrefO08583 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AlyrefO08583 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.9■□□□□ 0.94
AlyrefO08583 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
AlyrefO08583 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
AlyrefO08583 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
AlyrefO08583 Gm12933-201ENSMUST00000120203 872 ntBASIC20.89■□□□□ 0.93
AlyrefO08583 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
AlyrefO08583 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.89■□□□□ 0.93
AlyrefO08583 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.89■□□□□ 0.93
AlyrefO08583 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AlyrefO08583 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
AlyrefO08583 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
AlyrefO08583 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.88■□□□□ 0.93
AlyrefO08583 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.88■□□□□ 0.93
AlyrefO08583 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
AlyrefO08583 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.88■□□□□ 0.93
AlyrefO08583 Gm10033-202ENSMUST00000211874 928 ntBASIC20.88■□□□□ 0.93
AlyrefO08583 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
AlyrefO08583 Gm7143-201ENSMUST00000222811 859 ntBASIC20.88■□□□□ 0.93
AlyrefO08583 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AlyrefO08583 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
AlyrefO08583 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
AlyrefO08583 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
AlyrefO08583 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.87■□□□□ 0.93
AlyrefO08583 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.87■□□□□ 0.93
AlyrefO08583 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
AlyrefO08583 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
AlyrefO08583 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AlyrefO08583 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AlyrefO08583 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AlyrefO08583 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.86■□□□□ 0.93
AlyrefO08583 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
AlyrefO08583 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AlyrefO08583 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
AlyrefO08583 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
AlyrefO08583 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AlyrefO08583 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.85■□□□□ 0.93
AlyrefO08583 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
AlyrefO08583 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AlyrefO08583 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AlyrefO08583 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AlyrefO08583 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
AlyrefO08583 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AlyrefO08583 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AlyrefO08583 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AlyrefO08583 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AlyrefO08583 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AlyrefO08583 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
AlyrefO08583 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AlyrefO08583 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
AlyrefO08583 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
AlyrefO08583 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AlyrefO08583 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
AlyrefO08583 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.83■□□□□ 0.93
AlyrefO08583 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
AlyrefO08583 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
AlyrefO08583 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.82■□□□□ 0.92
AlyrefO08583 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.82■□□□□ 0.92
AlyrefO08583 Gm12441-201ENSMUST00000121806 588 ntBASIC20.82■□□□□ 0.92
AlyrefO08583 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms