Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.22■□□□□ 0.99
Atf6F6VAN0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6F6VAN0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atf6F6VAN0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Atf6F6VAN0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf6F6VAN0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Atf6F6VAN0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf6F6VAN0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf6F6VAN0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf6F6VAN0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf6F6VAN0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf6F6VAN0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atf6F6VAN0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Atf6F6VAN0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Atf6F6VAN0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Atf6F6VAN0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.2■□□□□ 0.98
Atf6F6VAN0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atf6F6VAN0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Atf6F6VAN0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.2■□□□□ 0.98
Atf6F6VAN0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atf6F6VAN0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.2■□□□□ 0.98
Atf6F6VAN0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Atf6F6VAN0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Atf6F6VAN0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf6F6VAN0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf6F6VAN0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atf6F6VAN0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Atf6F6VAN0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Atf6F6VAN0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf6F6VAN0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf6F6VAN0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atf6F6VAN0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf6F6VAN0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf6F6VAN0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Atf6F6VAN0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf6F6VAN0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf6F6VAN0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atf6F6VAN0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Atf6F6VAN0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf6F6VAN0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Atf6F6VAN0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.17■□□□□ 0.98
Atf6F6VAN0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Atf6F6VAN0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf6F6VAN0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf6F6VAN0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atf6F6VAN0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atf6F6VAN0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atf6F6VAN0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf6F6VAN0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Atf6F6VAN0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf6F6VAN0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf6F6VAN0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.16■□□□□ 0.98
Atf6F6VAN0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atf6F6VAN0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Atf6F6VAN0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.15■□□□□ 0.98
Atf6F6VAN0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Atf6F6VAN0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.15■□□□□ 0.98
Atf6F6VAN0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.15■□□□□ 0.98
Atf6F6VAN0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.15■□□□□ 0.98
Atf6F6VAN0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atf6F6VAN0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf6F6VAN0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Atf6F6VAN0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atf6F6VAN0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf6F6VAN0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.15■□□□□ 0.98
Atf6F6VAN0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atf6F6VAN0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atf6F6VAN0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Atf6F6VAN0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Atf6F6VAN0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atf6F6VAN0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Atf6F6VAN0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atf6F6VAN0 Gm10399-202ENSMUST00000202768 748 ntBASIC21.13■□□□□ 0.97
Atf6F6VAN0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.13■□□□□ 0.97
Atf6F6VAN0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Atf6F6VAN0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atf6F6VAN0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atf6F6VAN0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atf6F6VAN0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atf6F6VAN0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6F6VAN0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6F6VAN0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6F6VAN0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.12■□□□□ 0.97
Atf6F6VAN0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6F6VAN0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Atf6F6VAN0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6F6VAN0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6F6VAN0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atf6F6VAN0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms