Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cpsf4lE9Q2N0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.56■□□□□ 0.4
Cpsf4lE9Q2N0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 Gm7417-201ENSMUST00000192950 473 ntBASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cpsf4lE9Q2N0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4lE9Q2N0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4lE9Q2N0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4lE9Q2N0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4lE9Q2N0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cpsf4lE9Q2N0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4lE9Q2N0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.54■□□□□ 0.4
Cpsf4lE9Q2N0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4lE9Q2N0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4lE9Q2N0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Gm14117-201ENSMUST00000122417 843 ntBASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Gm45102-201ENSMUST00000207427 857 ntBASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Rps24-207ENSMUST00000224568 714 ntBASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4lE9Q2N0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4lE9Q2N0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4lE9Q2N0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4lE9Q2N0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4lE9Q2N0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4lE9Q2N0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cpsf4lE9Q2N0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4lE9Q2N0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.52■□□□□ 0.4
Cpsf4lE9Q2N0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.52■□□□□ 0.4
Cpsf4lE9Q2N0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpsf4lE9Q2N0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Cpsf4lE9Q2N0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4lE9Q2N0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.51■□□□□ 0.39
Cpsf4lE9Q2N0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.51■□□□□ 0.39
Cpsf4lE9Q2N0 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.51■□□□□ 0.39
Cpsf4lE9Q2N0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4lE9Q2N0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4lE9Q2N0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4lE9Q2N0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4lE9Q2N0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4lE9Q2N0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.5■□□□□ 0.39
Cpsf4lE9Q2N0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4lE9Q2N0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cpsf4lE9Q2N0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4lE9Q2N0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.5■□□□□ 0.39
Cpsf4lE9Q2N0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4lE9Q2N0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4lE9Q2N0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4lE9Q2N0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.49■□□□□ 0.39
Cpsf4lE9Q2N0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4lE9Q2N0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4lE9Q2N0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4lE9Q2N0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4lE9Q2N0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cpsf4lE9Q2N0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4lE9Q2N0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.47■□□□□ 0.39
Cpsf4lE9Q2N0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4lE9Q2N0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4lE9Q2N0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4lE9Q2N0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf4lE9Q2N0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cpsf4lE9Q2N0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4lE9Q2N0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4lE9Q2N0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4lE9Q2N0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4lE9Q2N0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4lE9Q2N0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf4lE9Q2N0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4lE9Q2N0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4lE9Q2N0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cpsf4lE9Q2N0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf4lE9Q2N0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cpsf4lE9Q2N0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms