Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp27D3YV89 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp27D3YV89 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp27D3YV89 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Mmp27D3YV89 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp27D3YV89 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp27D3YV89 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp27D3YV89 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp27D3YV89 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp27D3YV89 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp27D3YV89 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Mmp27D3YV89 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.3■□□□□ 0.36
Mmp27D3YV89 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp27D3YV89 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp27D3YV89 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Mmp27D3YV89 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp27D3YV89 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp27D3YV89 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp27D3YV89 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp27D3YV89 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp27D3YV89 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Mmp27D3YV89 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp27D3YV89 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp27D3YV89 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp27D3YV89 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp27D3YV89 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.28■□□□□ 0.36
Mmp27D3YV89 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp27D3YV89 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp27D3YV89 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp27D3YV89 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp27D3YV89 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp27D3YV89 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp27D3YV89 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp27D3YV89 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Mmp27D3YV89 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp27D3YV89 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp27D3YV89 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
Mmp27D3YV89 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp27D3YV89 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp27D3YV89 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.27■□□□□ 0.35
Mmp27D3YV89 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp27D3YV89 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp27D3YV89 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp27D3YV89 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp27D3YV89 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp27D3YV89 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp27D3YV89 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp27D3YV89 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp27D3YV89 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp27D3YV89 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp27D3YV89 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp27D3YV89 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.25■□□□□ 0.35
Mmp27D3YV89 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Mmp27D3YV89 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp27D3YV89 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mmp27D3YV89 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp27D3YV89 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp27D3YV89 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp27D3YV89 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.25■□□□□ 0.35
Mmp27D3YV89 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp27D3YV89 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp27D3YV89 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp27D3YV89 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp27D3YV89 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.24■□□□□ 0.35
Mmp27D3YV89 Gm22567-201ENSMUST00000175542 342 ntBASIC17.24■□□□□ 0.35
Mmp27D3YV89 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp27D3YV89 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mmp27D3YV89 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp27D3YV89 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Mmp27D3YV89 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp27D3YV89 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp27D3YV89 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp27D3YV89 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp27D3YV89 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp27D3YV89 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp27D3YV89 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp27D3YV89 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp27D3YV89 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp27D3YV89 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp27D3YV89 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp27D3YV89 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp27D3YV89 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp27D3YV89 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp27D3YV89 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Mmp27D3YV89 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Mmp27D3YV89 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp27D3YV89 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp27D3YV89 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp27D3YV89 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.21■□□□□ 0.35
Mmp27D3YV89 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Mmp27D3YV89 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms