Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rrn3B2RS91 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Rrn3B2RS91 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rrn3B2RS91 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rrn3B2RS91 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrn3B2RS91 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrn3B2RS91 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrn3B2RS91 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rrn3B2RS91 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rrn3B2RS91 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrn3B2RS91 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrn3B2RS91 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rrn3B2RS91 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rrn3B2RS91 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.73■□□□□ 0.91
Rrn3B2RS91 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rrn3B2RS91 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrn3B2RS91 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rrn3B2RS91 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrn3B2RS91 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrn3B2RS91 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrn3B2RS91 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.72■□□□□ 0.91
Rrn3B2RS91 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rrn3B2RS91 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rrn3B2RS91 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rrn3B2RS91 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rrn3B2RS91 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rrn3B2RS91 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rrn3B2RS91 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Rrn3B2RS91 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.71■□□□□ 0.91
Rrn3B2RS91 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
Rrn3B2RS91 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Rrn3B2RS91 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrn3B2RS91 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Rrn3B2RS91 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
Rrn3B2RS91 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrn3B2RS91 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rrn3B2RS91 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrn3B2RS91 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rrn3B2RS91 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrn3B2RS91 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rrn3B2RS91 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rrn3B2RS91 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rrn3B2RS91 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rrn3B2RS91 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rrn3B2RS91 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Rrn3B2RS91 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.68■□□□□ 0.9
Rrn3B2RS91 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrn3B2RS91 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrn3B2RS91 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rrn3B2RS91 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrn3B2RS91 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrn3B2RS91 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrn3B2RS91 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rrn3B2RS91 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrn3B2RS91 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrn3B2RS91 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.67■□□□□ 0.9
Rrn3B2RS91 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Gm22238-201ENSMUST00000175222 88 ntBASIC20.67■□□□□ 0.9
Rrn3B2RS91 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrn3B2RS91 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rrn3B2RS91 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rrn3B2RS91 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rrn3B2RS91 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rrn3B2RS91 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rrn3B2RS91 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rrn3B2RS91 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rrn3B2RS91 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rrn3B2RS91 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rrn3B2RS91 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.65■□□□□ 0.9
Rrn3B2RS91 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rrn3B2RS91 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rrn3B2RS91 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rrn3B2RS91 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rrn3B2RS91 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rrn3B2RS91 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rrn3B2RS91 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rrn3B2RS91 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rrn3B2RS91 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rrn3B2RS91 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.89
Rrn3B2RS91 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.64■□□□□ 0.89
Rrn3B2RS91 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rrn3B2RS91 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rrn3B2RS91 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rrn3B2RS91 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rrn3B2RS91 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rrn3B2RS91 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rrn3B2RS91 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rrn3B2RS91 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rrn3B2RS91 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rrn3B2RS91 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rrn3B2RS91 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 181.5 ms