Protein–RNA interactions for Protein: B1AWN9

Tnfrsf25, Tumor necrosis factor receptor superfamily, member 25, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf25B1AWN9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf25B1AWN9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.94■□□□□ 0.78
Tnfrsf25B1AWN9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf25B1AWN9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf25B1AWN9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf25B1AWN9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf25B1AWN9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf25B1AWN9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf25B1AWN9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Tnfrsf25B1AWN9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf25B1AWN9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf25B1AWN9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Tnfrsf25B1AWN9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf25B1AWN9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Tnfrsf25B1AWN9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.92■□□□□ 0.78
Tnfrsf25B1AWN9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf25B1AWN9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf25B1AWN9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf25B1AWN9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf25B1AWN9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf25B1AWN9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf25B1AWN9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf25B1AWN9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.9■□□□□ 0.78
Tnfrsf25B1AWN9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf25B1AWN9 Gm22238-201ENSMUST00000175222 88 ntBASIC19.9■□□□□ 0.78
Tnfrsf25B1AWN9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf25B1AWN9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf25B1AWN9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf25B1AWN9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Tnfrsf25B1AWN9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Tnfrsf25B1AWN9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Tnfrsf25B1AWN9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.89■□□□□ 0.77
Tnfrsf25B1AWN9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf25B1AWN9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf25B1AWN9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.88■□□□□ 0.77
Tnfrsf25B1AWN9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf25B1AWN9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf25B1AWN9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf25B1AWN9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf25B1AWN9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf25B1AWN9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf25B1AWN9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.88■□□□□ 0.77
Tnfrsf25B1AWN9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf25B1AWN9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.87■□□□□ 0.77
Tnfrsf25B1AWN9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf25B1AWN9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf25B1AWN9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Tnfrsf25B1AWN9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf25B1AWN9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf25B1AWN9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Tnfrsf25B1AWN9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf25B1AWN9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Tnfrsf25B1AWN9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf25B1AWN9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.85■□□□□ 0.77
Tnfrsf25B1AWN9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf25B1AWN9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf25B1AWN9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf25B1AWN9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.84■□□□□ 0.77
Tnfrsf25B1AWN9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf25B1AWN9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tnfrsf25B1AWN9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf25B1AWN9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf25B1AWN9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Tnfrsf25B1AWN9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf25B1AWN9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf25B1AWN9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf25B1AWN9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.84■□□□□ 0.77
Tnfrsf25B1AWN9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf25B1AWN9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf25B1AWN9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf25B1AWN9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf25B1AWN9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf25B1AWN9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf25B1AWN9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf25B1AWN9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf25B1AWN9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf25B1AWN9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Tnfrsf25B1AWN9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf25B1AWN9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Tnfrsf25B1AWN9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.82■□□□□ 0.76
Tnfrsf25B1AWN9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.82■□□□□ 0.76
Tnfrsf25B1AWN9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms