Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Slc9a6A1L3P4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Slc9a6A1L3P4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc9a6A1L3P4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc9a6A1L3P4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc9a6A1L3P4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc9a6A1L3P4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc9a6A1L3P4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.38■□□□□ 0.69
Slc9a6A1L3P4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.38■□□□□ 0.69
Slc9a6A1L3P4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Slc9a6A1L3P4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc9a6A1L3P4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc9a6A1L3P4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc9a6A1L3P4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc9a6A1L3P4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc9a6A1L3P4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.37■□□□□ 0.69
Slc9a6A1L3P4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc9a6A1L3P4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc9a6A1L3P4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc9a6A1L3P4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc9a6A1L3P4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc9a6A1L3P4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc9a6A1L3P4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc9a6A1L3P4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc9a6A1L3P4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc9a6A1L3P4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.36■□□□□ 0.69
Slc9a6A1L3P4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc9a6A1L3P4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.35■□□□□ 0.69
Slc9a6A1L3P4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc9a6A1L3P4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Slc9a6A1L3P4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Slc9a6A1L3P4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc9a6A1L3P4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc9a6A1L3P4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc9a6A1L3P4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.34■□□□□ 0.69
Slc9a6A1L3P4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc9a6A1L3P4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.34■□□□□ 0.69
Slc9a6A1L3P4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc9a6A1L3P4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc9a6A1L3P4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc9a6A1L3P4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc9a6A1L3P4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.34■□□□□ 0.69
Slc9a6A1L3P4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc9a6A1L3P4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slc9a6A1L3P4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc9a6A1L3P4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc9a6A1L3P4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc9a6A1L3P4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Gm10232-201ENSMUST00000089221 720 ntBASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc9a6A1L3P4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc9a6A1L3P4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc9a6A1L3P4 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.31■□□□□ 0.68
Slc9a6A1L3P4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc9a6A1L3P4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.31■□□□□ 0.68
Slc9a6A1L3P4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc9a6A1L3P4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc9a6A1L3P4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc9a6A1L3P4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc9a6A1L3P4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.3■□□□□ 0.68
Slc9a6A1L3P4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Slc9a6A1L3P4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.3■□□□□ 0.68
Slc9a6A1L3P4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc9a6A1L3P4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.3■□□□□ 0.68
Slc9a6A1L3P4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Slc9a6A1L3P4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Slc9a6A1L3P4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc9a6A1L3P4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc9a6A1L3P4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc9a6A1L3P4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc9a6A1L3P4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Slc9a6A1L3P4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc9a6A1L3P4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc9a6A1L3P4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc9a6A1L3P4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc9a6A1L3P4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Slc9a6A1L3P4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Slc9a6A1L3P4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.28■□□□□ 0.68
Slc9a6A1L3P4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc9a6A1L3P4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc9a6A1L3P4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc9a6A1L3P4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc9a6A1L3P4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc9a6A1L3P4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc9a6A1L3P4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
Slc9a6A1L3P4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms